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SCNpilot_cont_500_bf_scaffold_33851_4

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: 2667..2972

Top 3 Functional Annotations

Value Algorithm Source
Putative ranscriptional regulator, LacI-family n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CUY8_CLAM3 similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 101.0
  • Bit_score: 131
  • Evalue 6.30e-28
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 101.0
  • Bit_score: 131
  • Evalue 2.00e-28
LacI family transcriptional regulator {ECO:0000313|EMBL:KDP92023.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 101.0
  • Bit_score: 131
  • Evalue 8.90e-28

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 306
GTGCCACCGATCACCCCCCGCGACGAGTCATCGCGCGGCAGCAGACCACGGCCGACGATGAAGCACGTCGCCGCGCTCGCCGGTGTGGGCCTGAAGACGGTGTCGCGTGTCGTCAACGGCGAGCCGAACGTCTCGGAGGAGACGGCGGCCAGAGTGAGCTGGGCGATCGCCGAGCTCAACTACCAGGCCGATCTCAATGCAGGCAACCTCAAGCGCGCGAACGGTCGGACGATGTCGATCGGGCTCGCCCTGGGGAGCGTCGCGAACCCGTTCGCTGGCGCGATCCACCGGGCGATCGAGAGCACA
PROTEIN sequence
Length: 102
VPPITPRDESSRGSRPRPTMKHVAALAGVGLKTVSRVVNGEPNVSEETAARVSWAIAELNYQADLNAGNLKRANGRTMSIGLALGSVANPFAGAIHRAIEST