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SCNpilot_cont_500_bf_scaffold_42132_1

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: comp(1..330)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E751_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 110.0
  • Bit_score: 171
  • Evalue 4.60e-40
LysR family transcriptional regulator {ECO:0000313|EMBL:KDA05051.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 110.0
  • Bit_score: 185
  • Evalue 5.60e-44
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 110.0
  • Bit_score: 168
  • Evalue 1.20e-39

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGCCGATCAGCGATCTGAATCAGTTGCGCACGTTCGTCGTGCTCTACGAGCTGCGCAGCGTGACCGCCGCGGCGGAGTCTCTGCACGTGACGCAGCCGACCGTCAGCTACACGCTGCGGCGCCTGCGCGAGCGGTTCGGCGACGACCTGTTCCGGCGCGAGGGTCACGAGATGGTGCCGACGGGCAAGGCGACGCAGCTGTTCGGCCCGATCCACGACGCGCTGGCTCAGATCGACCAGACGGTCGACGAATCGGATGCCTTCGAGCCGGCATCCTTCACCGGCGCCGTCGCGATGGGGCTCACCTCGATCGGCGAGCAGACGTTCCTG
PROTEIN sequence
Length: 110
MPISDLNQLRTFVVLYELRSVTAAAESLHVTQPTVSYTLRRLRERFGDDLFRREGHEMVPTGKATQLFGPIHDALAQIDQTVDESDAFEPASFTGAVAMGLTSIGEQTFL