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SCNpilot_cont_500_bf_scaffold_45588_1

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: comp(40..939)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036EB1EF similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 302.0
  • Bit_score: 244
  • Evalue 1.50e-61
Transcriptional regulator {ECO:0000313|EMBL:EDY55406.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 276.0
  • Bit_score: 208
  • Evalue 1.70e-50
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 299.0
  • Bit_score: 204
  • Evalue 5.50e-50

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Taxonomy

Streptomyces sviceus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGGCACCGGCGGCTATGACCTCAACCTGCTGATCCCGCTGCGGGCGCTGCTGGAAGAATCCAACCTCACCCGGGCGGGCCAGCGGGTGCAGCTGGGGCAGTCGTCAATGAGCTCAGCGCTTGCGCGATTGCGCGTCGTGTTCAACGACGAGCTGCTCGTGCGCGTCGGCCGCGACTACGAGTTGACGCCGTTCGCGAAGGTGCTGCTGCCGCAGGTGCAGACGACCGTGCCGCTGCTCGAGCGCGTCCTCTCCGACGAGACCGCGTTCGATCCGGCATCCGCCCGGCGCACGCTCTCGATCATGCTGACCGACTACGGCATCATGCGGTTGCACGGGGCGATCGCGCAGGTGCTCGCGCAGGCGCCCGGCATCCAGGTCGAGTTCGTCGCGTTGCCCGAGCGGCCCATGGACAGCGAGCGCGATCTCGTGACGCACGACTTCGTCGTGACGGTGCCGGGGATCGGCATCGACGGCACGCACGTGCCCCTGCTCGAAGACGATTACGTCTGCCTCGTAGACGCCGACAACCCCGCGCTCGTCGACGGGCAGCTCTCGCTCGAGGCCTTCGTCGCGCTGCCGCAGGCGGTCGCGCAGTTCGGCCGACACCACTTCACGCCCGCCGACCGCCGCCTGCGCGAGCTCGACATCGACCGGCGCGAACCGCGCGTGACGACCTCTTCGTTCCTGCCGCTGCCGTCCGTCGTCGCCGGCACCGACCTCGTCGCCGTCGTGCCGCGCGAGCTCGCCCGCACCCTCGGACCGCTTACCGGCACCGTCGGGGCGGATGCCCCGTTCGGCTCGGTCGAGATCGCGCTCAAGCTGTGGTGGCATCCGAGTCACGACTCCGACCCCGTGCACACTTGGTTCCGCGAGCACCTCATCGCCGCGCTGAACTGA
PROTEIN sequence
Length: 300
MGTGGYDLNLLIPLRALLEESNLTRAGQRVQLGQSSMSSALARLRVVFNDELLVRVGRDYELTPFAKVLLPQVQTTVPLLERVLSDETAFDPASARRTLSIMLTDYGIMRLHGAIAQVLAQAPGIQVEFVALPERPMDSERDLVTHDFVVTVPGIGIDGTHVPLLEDDYVCLVDADNPALVDGQLSLEAFVALPQAVAQFGRHHFTPADRRLRELDIDRREPRVTTSSFLPLPSVVAGTDLVAVVPRELARTLGPLTGTVGADAPFGSVEIALKLWWHPSHDSDPVHTWFREHLIAALN*