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SCNpilot_cont_500_bf_scaffold_47808_2

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: comp(646..1242)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 198.0
  • Bit_score: 359
  • Evalue 3.90e-96
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 198.0
  • Bit_score: 344
  • Evalue 2.90e-92
3-isopropylmalate dehydratase small subunit n=2 Tax=Microbacterium RepID=H8E4C3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 198.0
  • Bit_score: 355
  • Evalue 4.00e-95

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGGAGAAGTTCACCACTCACACCGGCATCGCCGCTCCGCTGACCCGCTCGGCGGTCGACACCGACCAGATCATCCCGGCGGTGTACCTGAAGCGCGTCACCAAGACGGGCTTCGACGACGCGCTGTTCGCCAACTGGCGCCAGGACCCGGAGTTCGTGCTCAACCAGCCGGCGTACGCGGGGGCATCCGTTCTCGTCGCCGGCCCCGATTTCGGCACCGGTTCGAGCCGTGAGCACGCCGTGTGGGCGTTGCGCGACTATGGCTTCCGGGTCGTGCTGAGCCCGCGGTTCGCCGACATCTTCCGCGGCAACGCGGGCAAGCAGGGCCTGCTCGCGGGTGTCGTCTCCGAGTCGGACGTCGAGGCGCTGTGGGGCGCGATCGCCGCCTCGCCGGGAGCCCAGATCACGGTCGACCTCACCGAGCGCACGGCGCGGTTGGGTGACCTCCAGGTCTCCTTCGACATCGACGATTACACTAGGTGGCGGCTTCTCGAAGGGTTCGACGACATCGGACTCACACTGCGCAACGAAGACAGGATCGCGCAGTTCGAGGCGCGCCGAGAGGCGTGGCGGCCGCGGACACTACCCGTCCGCTAG
PROTEIN sequence
Length: 199
MEKFTTHTGIAAPLTRSAVDTDQIIPAVYLKRVTKTGFDDALFANWRQDPEFVLNQPAYAGASVLVAGPDFGTGSSREHAVWALRDYGFRVVLSPRFADIFRGNAGKQGLLAGVVSESDVEALWGAIAASPGAQITVDLTERTARLGDLQVSFDIDDYTRWRLLEGFDDIGLTLRNEDRIAQFEARREAWRPRTLPVR*