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SCNpilot_cont_500_bf_scaffold_56570_1

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 22 / 55 BSCG 28 / 51 ASCG 6 / 38 MC: 1
Location: comp(77..790)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI000370D05E similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 226.0
  • Bit_score: 411
  • Evalue 4.30e-112
Transcriptional regulator {ECO:0000313|EMBL:KIC58256.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 226.0
  • Bit_score: 408
  • Evalue 6.70e-111
mtrA; response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07670 two-component system, OmpR family, response regulator MtrA similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 226.0
  • Bit_score: 404
  • Evalue 2.90e-110

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGGCGCCCACCCGAAGGACGAACTCTCCGCTATGACTTCTCGCATCCTCGTCGTCGACGATGACACCGCGCTCGCGGAGATGATCGGCATCGTGCTGCGCACCGAGGGCTTCGAACCGGTGTTCTGCGCCGACGGCGCTGCGGCGGTGGATGCCTGGCGCACCCAGCGCCCCGACCTGGTGCTCCTCGACCTCATGCTGCCCGGAATGGACGGCATCGAGATCTGCACGCGCATCCGCGCCGAATCGGGTGTGCCGATCATCATGCTGACCGCCCGCACCGACACCGCCGACGTCGTCCGCGGCCTCGAGTCGGGGGCCGACGACTACATCGTCAAGCCGTTCAACCCGAAAGAGCTCGTCGCGCGCATCCGCACCCGGCTGCGCCCGGGCGCGCAGCCCGAGAGCGAGTCCCTGCGGGTCGGCGACGTCGTCGTCGACGTCGCGGCGCACGAGGTGCGGCGCGGTGAAGAGCCGATCGCCCTGACGCCGCTCGAGTTCGAGCTGCTGGTGGCACTGGCATCCCGTCCGCAGCAGGTGTTCTCGCGCGAGATGCTGCTCGAACAGGTGTGGGGCTACCACTACAAGGCCGACACCCGCCTGGTCAACGTGCACGTGCAGCGGTTGCGCGCCAAGGTCGAGATCGATCCCGACAATCCGAAGATCGTCATGACGGTTCGCGGAGTGGGCTACCGCGCCGGCGCGGTGGTGTGA
PROTEIN sequence
Length: 238
MGAHPKDELSAMTSRILVVDDDTALAEMIGIVLRTEGFEPVFCADGAAAVDAWRTQRPDLVLLDLMLPGMDGIEICTRIRAESGVPIIMLTARTDTADVVRGLESGADDYIVKPFNPKELVARIRTRLRPGAQPESESLRVGDVVVDVAAHEVRRGEEPIALTPLEFELLVALASRPQQVFSREMLLEQVWGYHYKADTRLVNVHVQRLRAKVEIDPDNPKIVMTVRGVGYRAGAVV*