ggKbase home page

SCNpilot_cont_500_bf_scaffold_20193_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 2..280

Top 3 Functional Annotations

Value Algorithm Source
Thiamine biosynthesis protein ThiF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 92.0
  • Bit_score: 162
  • Evalue 1.80e-37
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EIL92737.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 92.0
  • Bit_score: 162
  • Evalue 2.50e-37
thiF; Thiamine biosynthesis protein ThiF similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 84.0
  • Bit_score: 72
  • Evalue 1.00e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
GGCGAGGTGCTGCGCTTCATCGACGTCGACGAGGTCACGCCCCGCGACGTCGTGATCGATCTGCGCGGTCTTGACGAAGCGCCGACCTCGCCGTTGGCGAACGCCTTGCGCTTCACTCCGGAACGCCTCGCCGCGTTCACTGCCGAACACCCGCCCACCGACCGCCGGGTGGTGCTGTGCTGCCAGAGCGGTCTGCGCGCATGGCGTGCCGCGCGGCAGCTGCAATCCCGCGGCTACCGGCAGCTGGCACTGGTGACTCTTGCCGGCCTGCCATCATGA
PROTEIN sequence
Length: 93
GEVLRFIDVDEVTPRDVVIDLRGLDEAPTSPLANALRFTPERLAAFTAEHPPTDRRVVLCCQSGLRAWRAARQLQSRGYRQLALVTLAGLPS*