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SCNpilot_cont_500_bf_scaffold_18840_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(381..593)

Top 3 Functional Annotations

Value Algorithm Source
Cro/Cl family transcriptional regulator n=1 Tax=Pseudomonas tolaasii RepID=UPI0003634733 similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 70.0
  • Bit_score: 107
  • Evalue 5.20e-21
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KGE69442.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 70.0
  • Bit_score: 109
  • Evalue 1.50e-21
cro/C1-type HTH DNA-binding domain protein similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 70.0
  • Bit_score: 103
  • Evalue 2.40e-20

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGCCGATCATCATCGAACTGGATGTCATGCTGGCGCGGCGCAAGATGAAATCCAGGGACCTGGCCGCGGCGGTCGGCATCACCGAAGCAAACCTGTCCCTGCTCAAGCAGGGCAAGGTGAAAGGCGTGCGCTTCAGCACGCTCGACCCGATCTGCACGGCACTGGCGTGCCAGCCCGGCGACCTGCTGCGCCACGTCGACGACGAGCCCTGA
PROTEIN sequence
Length: 71
MPIIIELDVMLARRKMKSRDLAAAVGITEANLSLLKQGKVKGVRFSTLDPICTALACQPGDLLRHVDDEP*