ggKbase home page

SCNpilot_cont_500_bf_scaffold_21379_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(3..1895)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKE6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 646.0
  • Bit_score: 985
  • Evalue 2.50e-284
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 646.0
  • Bit_score: 985
  • Evalue 3.50e-284
bacterial translation initiation factor 2 (bIF-2) similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 647.0
  • Bit_score: 975
  • Evalue 6.30e-282

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1893
ATGTCGGACGTCACGATCAAACAACTCGCCCAGGTACTGGGCATGCCGGTCGACAAGTTGCTGACGCAGCTTGGCGAAGCGGGCATGAAATTCTCCGACCAGGAGCAGGTCATCAGCAGCACCGAGAAGGTGAAACTGCTCGGATTCCTGCGCCGAACCCACGGCAAGGCCGAAGCCGCCGCCGAGGTTGCGGATGCGGCACCGCGCCAGATCACCCTGCGACGACGCACGGTGGGCGAATTGAAGGTGGCCGGCTCCGGTGGTCGTGGCGCCGCCGGCCCCGCCAAGACGGTAAACGTGGAAGTGCGCGCCAGGCGCACCTACGTCAAGCGCAGCGTGATTGCCGAGGAGGCCAGCGCCGAACCCGAGCGCGAGGAGGCCGTGCGCACGCTGCAGGAATCGCAGCAGCAGCGCGAGCGCGAGGAGCGCGAACGGCTGGATTCCGAGCAGCGCCGCGAGAAGGACGCGCGCCAGCGCGAGCTCGACGAACAACAGCGCCAGGAAGAAGCCCGGCGTGCCGAAACGGCCGCCGAAGCGCAGAGCGCGGCGGATCTCGCAGAACCCGCGCCGGAAGCGCCTGCCGAGGAGCCGGTGGTCGCCAGCGAACCCGTCGACGAGGAGCCGGGCGTGCAGCGCATGGACCAGCGCGAGCTGGGCATGATCCTTCCGCGCATCCACGAGCCGCGCAAGCGCGAAAAACTGGTCAAGCCGCCCGCCCCGGCACCGGCTCCCGCACCGGCGCCCGCGCCGGCAGCGAGCGATGCGGCTCGCGGCGGCAAGGCACGGCATGGCCGCGAGCGCAGCGAGGACGTCGGCAGCAAGCACGAGCGCGACGGCAGCAAGCGCTTCGCCGGCGGCCAGATGCACCTCAGCGAGGCCGATCGCGCACGCCGCTCGTCCTCCAGCACCAAACGCGGCAAGGGCGGGCGCAGTGGCGGTCGCGACCTGCTGGCGCGCGGCAGCGGCGTGTCCGGCGGAACGCACGGGTTCTCCCGTCCCACCGCACCGGTGGTGCGCGAGGTGGTGGTGAGCGACACCAACGTGGTGGCCGATCTCGCCCAGAAGATGGCGGTGAAGGGCTCCGAGGTGGTGAAAGCCCTGTTCAAGATGGGCGTGATGGCGACGATCAACCAGACCGTCGACCACGACACCGCCGTGCTGGTGGTCGAGGAACTCGGCCATACGCCGGTGGCGGACAACCAGAACAACGCCGAGGAGACGCTCGCGGCGCATACCCAGAACATCGAGCTGGAAGGCGAGAAGGTTCCGCGGCCGCCGGTAGTGACGATCATGGGTCACGTCGACCACGGCAAGACCTCGCTGCTCGACTACATCCGGCGCACCAAGGTGGCATCCGGCGAAGCCGGCGGCATCACCCAGCACATCGGCGCGTACCACGTGAAGACCTCGCGCGGCGTGATCACCTTCCTCGACACCCCGGGCCACGCGGCGTTCACCTCGATGCGCGCCCGCGGTGCGCAGTCGACCGACATCGTGATCCTGGTGGTGGCTGCCGACGACGGCGTCAAGCCGCAGACGATCGAGGCGGTCAAGCATGCCCGCGCGGCCAACGTGCCGATCATCGTGGCGGTCAACAAGATGGACAAGGACGGTGCCAACCCCGACAACGTGAAGCAGGGCCTGGTTGCGCAGGAAGTGGTGCCGGAAGACTGGGGCGGCGACGTGCAGTTCGTGCCGGTGTCGGCCAAGACCGGCATGGGCATCGAGGAACTGCTCGAAGCGATCTCGATCCAGGCCGAGGTGATGGAGCTCAAGGCGGTGGCCGACGGCCGCGCCTCCGGCGTGGTGATCGAATCCAGCCTGGATCGCGGCCGCGGTCCGGTGGCCACCGTGCTGGTTCAGCAGGGCACGTTGCGCAAGGGCGACTTCGTG
PROTEIN sequence
Length: 631
MSDVTIKQLAQVLGMPVDKLLTQLGEAGMKFSDQEQVISSTEKVKLLGFLRRTHGKAEAAAEVADAAPRQITLRRRTVGELKVAGSGGRGAAGPAKTVNVEVRARRTYVKRSVIAEEASAEPEREEAVRTLQESQQQREREERERLDSEQRREKDARQRELDEQQRQEEARRAETAAEAQSAADLAEPAPEAPAEEPVVASEPVDEEPGVQRMDQRELGMILPRIHEPRKREKLVKPPAPAPAPAPAPAPAASDAARGGKARHGRERSEDVGSKHERDGSKRFAGGQMHLSEADRARRSSSSTKRGKGGRSGGRDLLARGSGVSGGTHGFSRPTAPVVREVVVSDTNVVADLAQKMAVKGSEVVKALFKMGVMATINQTVDHDTAVLVVEELGHTPVADNQNNAEETLAAHTQNIELEGEKVPRPPVVTIMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVKTSRGVITFLDTPGHAAFTSMRARGAQSTDIVILVVAADDGVKPQTIEAVKHARAANVPIIVAVNKMDKDGANPDNVKQGLVAQEVVPEDWGGDVQFVPVSAKTGMGIEELLEAISIQAEVMELKAVADGRASGVVIESSLDRGRGPVATVLVQQGTLRKGDFV