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SCNpilot_cont_500_bf_scaffold_27446_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 1..2106

Top 3 Functional Annotations

Value Algorithm Source
type IV secretion protein Rhs n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B39BFB similarity UNIREF
DB: UNIREF100
  • Identity: 28.6
  • Coverage: 531.0
  • Bit_score: 167
  • Evalue 4.20e-38
Uncharacterized protein {ECO:0000313|EMBL:KFN44605.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 255.0
  • Bit_score: 128
  • Evalue 4.00e-26
RhsD protein precursor similarity KEGG
DB: KEGG
  • Identity: 24.6
  • Coverage: 630.0
  • Bit_score: 125
  • Evalue 5.80e-26

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Taxonomy

Arenimonas oryziterrae → Arenimonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2106
TGCTGTCTGGCCACCTCGGTCATGGCGGCCGATGTCCAGTACCAATTCAACGGCTCGACGTACCCGAGCCTCGGCGCCGCCGAGGCGGCGATGCGCGCGGCCCACCCGAACTGGGCGAGCAGCCTGCATGTCTGCAGCGTCGCCAACGGCACGAACACGGCGACGATCACCTATTGCACGTCGCCACAGGCCGCGCAGTACTGGATCAGCAACTACAGCTCGCCGGGCATCGGCAGCCCCGGCTGCACGGCCAGCACCGGCCCCTTTACGAATTACTGCAACTCCGAAGGGATGCTTGTGTCGGCGCTGTCTGCACGGGTCGCCAACGGCACGACGACATGCCTGGTGGGCGAGAGCGAGTCGGGCTTCTACGCGTCATCCCCGAATGCCTGGGCCACTTCGTACTACAGCTCCGGCGGCAGCAACATCAATTTCGCGGACGCCAGCTACTACAGCGGCCAGAGCACGTCGCGGTGGGTTACGTTCCAGACCCGCGCGTGCTCTGCGCAGAGCAGTGACCCCACCAGCGCGTCGTACTACGAGCTCCGCCTGGATGAGGCGTTTCAGTGCCCGGCTGGCTACACACCGAGCGCTGGCCTGCCGCTGTCCCAGTTCCCGTTCGTCTGTGTCGGCGGATCGGTCACGATCATCAAGCAGGCGGCGGAGAACGTCAGCTCCTGTCCCCACACGGATCACCCGTGCGCGCCGGCGACGGGCGAGAAGCTGCTGACCGAGACGGACTTCACTTGGCGTGGCCATGCGTTCCAGCGGATGTACGCCTCCGGGCACGAGACGCCGGCCAACGCCGGCATGGGCCGGTCGTGGTCGGACAGTTGGGCCGACTCGCTGATCCCGCCCGTACCCTCGCCGAGCGAGTCGGCCCAGTGGCGCAACGGGCGCAATGACCTCGAGACCTTCAAGTTCGCGCCGAACAGCTCGACCACGATGCTCTCCCAGTCCACACCCGGCCGCACTCTGGTGCTGCAGACGGACGGGAGCTGGATGCTCACCGACACCTCGACCACCTTCCGCCATTTCAGCGCGGCCGGCGCGCAAATCGGCGAGGGCGACGTGAACGACCCGGCGGGCCAACTCGCGTTTGCCTACGAGAACGGCCAACTGGCCACGGTCACCGACGGTACCGGACAAAGCCTCACCTTCGGGTACAACACCGCCGGCCAGATGGCCACCATCACCGACGATGCGAGCACGGTGCTGGCCAGCTACGGTTACGACGCGAGCGGCAATCTCACTGCGGCGACCTATCCGGACAGCAAGAGTCGGGCGTATGCCTACGGCGAGTCGACGCACCTGTGCGTTGGCGCGACCGGCGACTGCCAGGCGGCCTATTTCTCCGCCTACCTGACCGGCGTGAGCGACGAGACCGGCCATCGGATCCTCGATGCCACCTATGACGAGTCCGGGCGGGTGGTGTCGAGCCTGCAGCCGTCCGGCTCGACGGCCACGACGCTCAGTTACCCGACGGCCGGGCAGACGCAGGTTGTGGAATCCGGTCAGGGCACGGTGCTCTGGACGTTTACGCAGGATCTCTACCGGAAGCCGGCGTCGCGCAAGGTCTACGATGGATCGCGCCTGGTCAGTACCGAGACGTGGGTGTGGGGCTCCGGGAATACGAGCCTCGCCTACACCGATCCGAATGGCGCGGTCACTACCACCACATACAACGCCGCAGGCCTGCCGGTGACCGAGGTCGATGCGCAGGGCAAGCCCGAGCAGCGGACGATCAAGACGACGTGGAGCACCGGGAGCCAGCCGCAACCGCTGACCGTCACGGTCGCGAACGCCGCCGGCGCGACGGTGCGCGAGACGTCGTACGCCTACAACGGCAGGGGCCAGCTCACCACGACCACAGTGACAGATCCGGAGACCGCCGCGACCCGGACAATCACCAAGGCCTACTGCGAGTCCGCCGATCTCGGTACCGGTGGCTGCGCGCTGCTGGGCCAGCTGAAGTCCGTCACTGACGCCCGCGGGAACGCCAGCGCGTTCGCCTACCGTCTGACTGACGCGACGGGCTGCAACACGGCGCCGGCGACGTGCGCCTACCGCAAGGGCGACCTCTACCAGGTGACCGATGCGGCCGGC
PROTEIN sequence
Length: 702
CCLATSVMAADVQYQFNGSTYPSLGAAEAAMRAAHPNWASSLHVCSVANGTNTATITYCTSPQAAQYWISNYSSPGIGSPGCTASTGPFTNYCNSEGMLVSALSARVANGTTTCLVGESESGFYASSPNAWATSYYSSGGSNINFADASYYSGQSTSRWVTFQTRACSAQSSDPTSASYYELRLDEAFQCPAGYTPSAGLPLSQFPFVCVGGSVTIIKQAAENVSSCPHTDHPCAPATGEKLLTETDFTWRGHAFQRMYASGHETPANAGMGRSWSDSWADSLIPPVPSPSESAQWRNGRNDLETFKFAPNSSTTMLSQSTPGRTLVLQTDGSWMLTDTSTTFRHFSAAGAQIGEGDVNDPAGQLAFAYENGQLATVTDGTGQSLTFGYNTAGQMATITDDASTVLASYGYDASGNLTAATYPDSKSRAYAYGESTHLCVGATGDCQAAYFSAYLTGVSDETGHRILDATYDESGRVVSSLQPSGSTATTLSYPTAGQTQVVESGQGTVLWTFTQDLYRKPASRKVYDGSRLVSTETWVWGSGNTSLAYTDPNGAVTTTTYNAAGLPVTEVDAQGKPEQRTIKTTWSTGSQPQPLTVTVANAAGATVRETSYAYNGRGQLTTTTVTDPETAATRTITKAYCESADLGTGGCALLGQLKSVTDARGNASAFAYRLTDATGCNTAPATCAYRKGDLYQVTDAAG