ggKbase home page

SCNpilot_cont_500_bf_scaffold_28456_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(2..1768)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter involved in gliding motility, auxiliary component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU73_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 589.0
  • Bit_score: 917
  • Evalue 6.00e-264
  • rbh
ABC transporter involved in gliding motility, auxiliary component {ECO:0000313|EMBL:EIM03015.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 589.0
  • Bit_score: 917
  • Evalue 8.50e-264
ABC-type uncharacterized transport system involved in gliding motility, auxiliary component similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 590.0
  • Bit_score: 911
  • Evalue 1.00e-262
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1767
ATGCCGCGCCTGCGCCTGCCCCGCCTGCTCACCACGCCGCTGCGCCTGACCCGCAGCAGCTGGCTGTACGCCGGCCTGGTGGCGCTGGTGCTGGTGCTGGTGCCGCTGGTGGTGGCCAGCAGCCGCTGGCTGCATGCCACGCGGATCGACCTGACCGCTGACCAGCTCTACACGCTGACGCCCGGCACGCGGCACATCGTGGACAGCCTGCAACGGCCACTGCAGCTGACCCTGTACTTCTCCGAGCACGCCACCCGCGACCTGCCCAAGCTGCGCAGCTACGAGCGGCGCGTCAACGAGATGTTGCAGGAGATGGTGGCGCGCTCGCACGGGCGTATCCGCCTGCGCGTGATCGACCCGGTGCCGTATTCGGACGACGAGGCGGGCGCCGAGGGCAGCGGGCTTATTGCCGCCAATGGCGGCAGCAACGGCGAGCGGGTGTTCTTCGGACTGGCCGGCAGCGCCATGGCGCCGGGCGAGGCGCGTGGTGCGGAGGACGCCGGCACGCCGGAAAAATCGCTCTCGATCGCGTTCTTCGATCCCTCGCGCGAGGCCTTCCTCGAATACGACATCGCCAAGCTGCTGTACGAGCTGAACCAGGTGCGCAAGCCGGAGATCGGCGTGCTCAGCTCGCTGCCGGTGCAGGGCGACCTGGCGCTGGGCGAGCAGCCCTGGGCGGTGATGCAGCAGCTGGGCCAGTTGTTCGAGCTGAAGACCCTCGACGCCGCCACCCTGCAGCACGTGGATGATCGCCTGAAGGTGCTGCTGCTGATCCACCCCAAGCAGCTGCCGCCGGCCGCGCAGTACGCGATCGACCAGTACGTGATGGGCGGCGGCCACCTGGTGGTGTTCGTCGATCCCGATGCCGAGCTCGACGCCGCACCGTTCACGCCCGACATCAGCGGCTTGCCTGCGCACGCCTCGGACCTGCCGCGCCTGTTCGCCGCGTGGGGCGTGGAATACCAGCCGCGCGAGGTGGTGCTGGACCGCAGCCGCGGCCTGCAGATCGAGCTGGCCGGCAGCAGCCTCAACCATCCGGCAATGCTCGGGCTGGGCGACCAGGAGCTCAACCGCAATGATCCGGTGACCGCCAGCCTGCAGCGCATCAACGTCTCCAGCATCGGCCATTTCGACCTCACCCGGACCGCGACCGCGCGGCTGGTCCCGCTGCTGCAGAGCAGTGCCGACGCCGAGCTGGCGCCGACCCAGCGGGTGATGGATGCCAGCAGCGATCCGACCAGCCTGCTCGAAGACTACAAGGCGGACAACGCGCACTACGTGCTGGCGGCGCGGTTGCGTGGCACCTTCGTCAGCGCGTTTCCCGAGGACGCCGGCAAGCCGGGCCACCGTGCGCATTCGGCGGCCAACGCACAGGTGGTGCTGGTGGCCGACACCGACGTGCTCAGCGATCGTCTGTGGGTGGAGCCGCAGACCGTGCTGGGCCAGACCATGGTGCGCATCTTCGCCAACAACGGTGATTTCGTCACCAACCTGGTCGACAACCTCAGCGGCTCGTCGGCGCTGCTGTCGATCCGCGCGCGCTCCACCTCGCAGCGGCCGTTCACCCGGGTGCAGGCGCTGCGCAACGTGGCCGACCAGAAGTTCCTGCAGAAGGAGCAGGAGCTGGAGAAGGAGCTGGCCGACACCCGCCGCCGGCTGGACGAGCTGCAGCCGGCCAAGGGTGCGCGGTCGAGCACGGTCACCCCCGAGCAGCGCCGCGAGATCGAGCAGTTCCGCCAGCGCCAGCTCGCCATCAACAAGGAGCTG
PROTEIN sequence
Length: 589
MPRLRLPRLLTTPLRLTRSSWLYAGLVALVLVLVPLVVASSRWLHATRIDLTADQLYTLTPGTRHIVDSLQRPLQLTLYFSEHATRDLPKLRSYERRVNEMLQEMVARSHGRIRLRVIDPVPYSDDEAGAEGSGLIAANGGSNGERVFFGLAGSAMAPGEARGAEDAGTPEKSLSIAFFDPSREAFLEYDIAKLLYELNQVRKPEIGVLSSLPVQGDLALGEQPWAVMQQLGQLFELKTLDAATLQHVDDRLKVLLLIHPKQLPPAAQYAIDQYVMGGGHLVVFVDPDAELDAAPFTPDISGLPAHASDLPRLFAAWGVEYQPREVVLDRSRGLQIELAGSSLNHPAMLGLGDQELNRNDPVTASLQRINVSSIGHFDLTRTATARLVPLLQSSADAELAPTQRVMDASSDPTSLLEDYKADNAHYVLAARLRGTFVSAFPEDAGKPGHRAHSAANAQVVLVADTDVLSDRLWVEPQTVLGQTMVRIFANNGDFVTNLVDNLSGSSALLSIRARSTSQRPFTRVQALRNVADQKFLQKEQELEKELADTRRRLDELQPAKGARSSTVTPEQRREIEQFRQRQLAINKEL