ggKbase home page

SCNpilot_cont_500_bf_scaffold_32741_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: 543..896

Top 3 Functional Annotations

Value Algorithm Source
Transposase, OrfA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 117.0
  • Bit_score: 206
  • Evalue 1.80e-50
Transposase, OrfA {ECO:0000313|EMBL:EIM01485.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 117.0
  • Bit_score: 206
  • Evalue 2.50e-50
transposase similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 117.0
  • Bit_score: 193
  • Evalue 2.90e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGCCCAAACCAGGTCCACGAACCACCTACCGCTATACCCAGGAATTCAAGGCAACCGCTGTCCGTTTGAGCCTGTTACCGGGCGTCGCGGTGGGTGACGTTGCCCAGTCGCTTTACATCCACCCGTTCATGCTGTCTCGTTGGCGCAAACAGGCGCGCGAGGGATTGATCATGACGAAGGGTGTGGCGGTCGACAAAGCCGTGGCAGCGGAGCTGAAGGAGCTGCGTCGGGTGAAGAAGGCCTACGAGCAGCTGAAGATCGAGCATGACCTTTTAAAAAAAGCGATCGCGTTCACTTCCAGTCCAAGGCCGACATCTTCGCCTTCATCCGTCAGCAAGAGCACCACCCGGTGA
PROTEIN sequence
Length: 118
MPKPGPRTTYRYTQEFKATAVRLSLLPGVAVGDVAQSLYIHPFMLSRWRKQAREGLIMTKGVAVDKAVAAELKELRRVKKAYEQLKIEHDLLKKAIAFTSSPRPTSSPSSVSKSTTR*