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SCNpilot_cont_500_bf_scaffold_30588_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(2106..2615)

Top 3 Functional Annotations

Value Algorithm Source
Two component LuxR family transcriptional regulator n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HQB7_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 168.0
  • Bit_score: 239
  • Evalue 2.10e-60
LuxR family transcriptional regulator {ECO:0000313|EMBL:ETM63282.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 168.0
  • Bit_score: 239
  • Evalue 3.00e-60
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 165.0
  • Bit_score: 225
  • Evalue 1.70e-56

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Taxonomy

Pseudomonas sp. M1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
TTCCTCGACCATCCCTCCGCCATGGTGCCGAGCTGCCTGATCCTCGACGTCAACCTTCCCGGCCTCAACGGCCTGGACCTGCAACAACGCATCGCCGCCGAGCGGCCACACATGCCGATCATCTTCATCACCGGCTTCGGCGACGTACCCATCACGGTCCGGGCGATGAAGGCTGGTGCGGTGGAATTCCTCACCAAGCCTTTTGATGACGTCGTGCTGCTGCAGGCCATCGACAGCGCCATCGACCGCAGTCGCGATGCCTTGGGCCGCGAAAGGAACCTGCAGGCACTGCGAACTGCCTATGCCACGCTGACCCCGCGCGAGCAGCAGGTGCTGGCGATGGTGGTGGCCGGTCGCCTGAACAAGCAGATCGGCGCCGACCTGGAAATCAGCGAAATCACGGTCAAGGCCCATCGCGGCAAGGTCATGCGCAAGATGAAGGCGCACTCGCTCGCCGACCTGGTGAAGATGGCCACCGCACTCTCCGCAGCGCCACCGGGGCAGGACTGA
PROTEIN sequence
Length: 170
FLDHPSAMVPSCLILDVNLPGLNGLDLQQRIAAERPHMPIIFITGFGDVPITVRAMKAGAVEFLTKPFDDVVLLQAIDSAIDRSRDALGRERNLQALRTAYATLTPREQQVLAMVVAGRLNKQIGADLEISEITVKAHRGKVMRKMKAHSLADLVKMATALSAAPPGQD*