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SCNpilot_cont_500_bf_scaffold_39075_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 5 / 55 BSCG 13 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(1069..1593)

Top 3 Functional Annotations

Value Algorithm Source
D-alanine/D-serine/glycine permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WA66_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 174.0
  • Bit_score: 333
  • Evalue 1.40e-88
D-alanine/D-serine/glycine permease {ECO:0000313|EMBL:EIL96357.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 174.0
  • Bit_score: 333
  • Evalue 2.00e-88
gamma-aminobutyrate permease-like transporter similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 174.0
  • Bit_score: 327
  • Evalue 1.90e-87

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
GCCGCGGCCAGCCTGATCAATTTCGTGGTGCTGACCTCGGCCACCTCGTCGGCCAACAGCGGCATCTTCTCCACCAGCCGCATGCTGTACGGCCTGGCCGAAGAAAAGCATGCGCCGAAGACGTTCGGTCGGCTGTCGCGCGCTGCGGTGCCGTCGCTGGGCCTGTTGTTCTCCTGCTTCTGCCTGCTGCTGGGTGCGGCGCTGATCTACCTGATTCCGGACCTCGTCACCGCCTTCACCCTGGTCACCACGGTGTCGGCGGTGCTGTTCATGTTCGTGTGGTCGCTGATCCTGTTTGCCTACATGGCCTATCGGCGCAAGCGCCCGCAATTGCACGAGGCGTCGATCTACAAGATGCCCGGCGGCGTGTTCATGTGCTGGGTGTGCCTGGCGTTCTTCGTGTTCGTGCTGGTACTGCTGAGCCTGCAGCCGGATACGCGCGAGGCGCTGATTGCGAGTCCGGTGTGGTTCGTGCTGCTGGGGATCGGTTACGCGTGGAAGGGGCGCCGGGCGCGCCGCGCATGA
PROTEIN sequence
Length: 175
AAASLINFVVLTSATSSANSGIFSTSRMLYGLAEEKHAPKTFGRLSRAAVPSLGLLFSCFCLLLGAALIYLIPDLVTAFTLVTTVSAVLFMFVWSLILFAYMAYRRKRPQLHEASIYKMPGGVFMCWVCLAFFVFVLVLLSLQPDTREALIASPVWFVLLGIGYAWKGRRARRA*