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SCNpilot_cont_500_bf_scaffold_31315_2

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 892..1899

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B5DF0B similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 336.0
  • Bit_score: 620
  • Evalue 8.70e-175
RND transporter {ECO:0000313|EMBL:AJR25299.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 334.0
  • Bit_score: 508
  • Evalue 5.20e-141
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 336.0
  • Bit_score: 456
  • Evalue 5.20e-126

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Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGAAATTCGACACAAGCTCGCGCGCGCAGCTGGGCATGGCCGCCGCGGCGCTCGCACTCGCGGCGGGTGGCCTCGGCTATGGCCTCGCGAATTGGCGCCATGAGTCTCCGCCTGGAGCAACAGCGCAAAGCGGACGCAAGATCCTCTACTGGTACGATCCGATGGTCCCGAGCCAGCATTTCGACAAGCCGGGCAAATCGCCTTTCATGGATATGGAGCTTGTCCCCAAATATGCCGACGAAGCGGCGAGCGGCGAGACCGGCGTGGCGATCGACCCAAGCCGCACGCAATCGCTTGGCCTGCGCATCGCGGAGGCGCGAACGGGCACGCTGGGATCGAGCCTCGCGGCGACCGGTACGATCGAGTTCAACGAGCGCGACATCGCCATCGTCCAGGCGCGAACTGGCGGCTTCGTCCAACGGGTCTATGCGCGCGCGCCGGGCGATGTGATCGGGGCAGGCGCCCCGCTCGCCGACATACTGGTGCCGGAATGGGCGGGCGCACAGGCGGAATATCTGGCCGTCCGGCGGATCGGTGATGTGGGCCTCGCTCGCGCGGCCCGTCAGCGCCTGCTCTTGCTGGGCATGCCCACCGGAACGGTCGCCGCAGTCGAGCGGAGCGGGCGACCGCATAATGTGGTGACGATCTCGGCGCCGACCGGCGGCACGATCAAGACGCTCGGCGTCCGGGCCGGGATGACGGTCGCGAGCGGTCAGACACTCGCCGAGGTGAATGGGCTCGGTACGGTGTGGCTCAATGCCGCGGTGCCGGAGGCGATGGCCGGCAGGCTTCGCCCGGGCCAGAGCGCGACCGCGACCCTCGCCGCCTATCCGGGCGAGCGCTTTACCGGCCGCATCGCCGCGATCCTCCCAAGCGTCGCCGCCGAAAGCCGGACGCTCACCGTGCGGATCGAACTTTCCAACCGAGCCGGGCGCCTGCGCCCTGGCATGTTCGCCTCGGTCGATCTCGGCGACGCTGCGCGGCCGGCACTGCTCGTCCCCTCGGAG
PROTEIN sequence
Length: 336
MKFDTSSRAQLGMAAAALALAAGGLGYGLANWRHESPPGATAQSGRKILYWYDPMVPSQHFDKPGKSPFMDMELVPKYADEAASGETGVAIDPSRTQSLGLRIAEARTGTLGSSLAATGTIEFNERDIAIVQARTGGFVQRVYARAPGDVIGAGAPLADILVPEWAGAQAEYLAVRRIGDVGLARAARQRLLLLGMPTGTVAAVERSGRPHNVVTISAPTGGTIKTLGVRAGMTVASGQTLAEVNGLGTVWLNAAVPEAMAGRLRPGQSATATLAAYPGERFTGRIAAILPSVAAESRTLTVRIELSNRAGRLRPGMFASVDLGDAARPALLVPSE