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SCNpilot_cont_500_bf_scaffold_4872_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 960..1412

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQL0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 150.0
  • Bit_score: 184
  • Evalue 7.20e-44
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 150.0
  • Bit_score: 184
  • Evalue 2.30e-44
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.7
  • Coverage: 150.0
  • Bit_score: 184
  • Evalue 1.00e-43

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 453
ATGATCCTGCAGCACAGCCTTGGGAAAAAAAATACGTTCAAAGGCGTGCAGGCTATCTTTATTGAACATCCCCAAAATACCTTCCTCCCTTATTTTGTAGAAGACGGCCGCATAAAAAGCGACCAGGAAACCTATGTTAAAATCGAAGCCGTGCACTCCCGTGAAAACGCCCGTAAACTGCTGCAGAAAGAAATATGGCTGACAGCGGAAGATTTTGAGAAATGTGCCGGGAAATCGTCTCCCATATCAGTTCTGGGATACCATGTGATCCATAATGATGAAGATCTCGGAGAGATCAATGAAGTGATAGAACAACCACATCAATTGCTATGCAGCATCAGCCTTCGCGGGAAAGAAGTACTGATCCCCCTGCACGAGGAAACTTTGAAGCAGATTGATAATAAAGCAAAAAAAATATACGTTATTCTTCCGGACGGTCTGCTGGATTTATGA
PROTEIN sequence
Length: 151
MILQHSLGKKNTFKGVQAIFIEHPQNTFLPYFVEDGRIKSDQETYVKIEAVHSRENARKLLQKEIWLTAEDFEKCAGKSSPISVLGYHVIHNDEDLGEINEVIEQPHQLLCSISLRGKEVLIPLHEETLKQIDNKAKKIYVILPDGLLDL*