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SCNpilot_cont_500_bf_scaffold_4214_13

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 8528..8764

Top 3 Functional Annotations

Value Algorithm Source
Putative two component, sigma54 specific, transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6W5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 79.0
  • Bit_score: 146
  • Evalue 1.50e-32
Fis family transcriptional regulator {ECO:0000313|EMBL:KIC93890.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 79.0
  • Bit_score: 147
  • Evalue 9.30e-33
putative two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 79.0
  • Bit_score: 146
  • Evalue 4.60e-33

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 237
ATGTCAAATATTCTGATCATTGATGACGAAAAAGCCATCCGTAAAACACTCGGTGAAATACTTTCCTATGAAGGCTATAAAATTGATGAAGCGGGAGATGGAGAAGAGGGACTGAAACGTTTCAGGGAAAAAAACTATGATGTGGTGTTATGCGATATCAAGATGCCGAAAATTGACGGCATTGAATTTCTTGATAAAGCCGGGGAGGTAAACCCTGATGTGCCCATTATAATGATC
PROTEIN sequence
Length: 79
MSNILIIDDEKAIRKTLGEILSYEGYKIDEAGDGEEGLKRFREKNYDVVLCDIKMPKIDGIEFLDKAGEVNPDVPIIMI