ggKbase home page

SCNpilot_cont_500_bf_scaffold_8116_4

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(2219..4060)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003811836 similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 615.0
  • Bit_score: 699
  • Evalue 3.50e-198
  • rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 619.0
  • Bit_score: 679
  • Evalue 4.00e-192
membrane protein OxaA; K03217 preprotein translocase subunit YidC similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 629.0
  • Bit_score: 607
  • Evalue 5.70e-171
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1842
ATGCAATTTGATAAAAACGCGATTATTGGCTTTGTACTGCTGGCATTGATGTTCCTTGGCTTTTTTTATTTTACCCGTACGGGGCAGCTTGAAGCGGAAAAGCAGCAAAAGCATATACGCGATTCTATTGCAGCCCTTCAGCCTAAAATTGATACTGCTGCAGCCCGTCTTGATTCCATGCACCACGAACAACAAAGCAGGATCGCTGCTGCTGGTCAGTTCCAGGCAGCAGTGAACAGTGTAGAAAAAGAGACTACGCTTGAAACAGATGTTTTAAAGATCACTTTCAGCAACAAGGGCGCCCAGCCAAAGCTTGTTCAGCTAAAAAAATATAAATCTATTGACAGCCAGGATGTAAAGCTGGTAGAAGAAGGTTTTGATAAGATCACTTATCCCGTGAATACCGATGCAAACCGTACTGTTCAGATCAGTGATCTGTATTTTGAAGGAGGTGAAGCATTGAAAAATGCCGATGGCGGTCAAACCCTTGCTTACCAGCTTAGCGATTCTTCAGGCAGGAAAATCATACACCGGTTTACACTTCACCCGGGCAATTATATGATTGACTGGAACTTGGAGATAGAAGGAGCCGGTAGCCTGCTTACTCAAAACAGCATTAATTTCCTCTGGCAGAACGAGGTAAAGCAGCATGAAAAGGATATTGTTACTGAAAAAAGGGAAACGCAGGTAGGTTTTTGGATCAATAACGACTATGACTATTTTACATTGGGGCGTACTCATGAAAAGCAGTTTGAGAACCCTTTAAAATGGTTGAGCGTTAAGCAGAAATTTTTCAATACCACGCTCATTTCAAAAAATAATTTTAATAGCGGTTCCATTAATTGTTCTGAAAGCCATGATTCCACTGGTATTATTACTGCAGCAACTGCCAGTCTTAAAATGATACTGCCTGCCGGTAATGTGGCAAATGTTCCTTTGCAGATTTACTATGGGCCCAATGATTATACAATATTGAAGAGCTATGATATGGGGCTTCAGAACGTCATTAACCTGGGGCAGGGTATTTACACTTTTGTTAAGTATATTAACAGGTGGCTGGTGATGCCTGTATTTGATTTTTTCAAGGGTTTTGTCGGGAGCTATGGGCTTGTGATCGCTCTCCTTACTATCTTTATCCGTGTGCTCACCTCTCCGTTGTTGTACAAGAGTTACCTGAGCGGTGCAAAAATGAAGGCGTTGCGCCCGGAGCTTGACTTGCTGAAAGCTAAATTCAAGGATGATCAGCAGGGCTATGCAATGGAGCAGATGAAGGTTTTCAGAAGCGCTGGAGTGAATCCGCTGGGGGGGTGTATGCCGGCATTGCTGCAGATACCGATATTCTTTTCGTTGTACAGCTTTTTTAACTCAACCATTGCGTTAAGAGGGCAGGATTTTTTGTGGGCAAATGATCTTTCTTCCTACGATTCCATATTGACTTTCGGATTTAATATCCCGTTTTACGGTAATCATATAAGCCTGTTTACCCTGCTGGCTACAGCCAGCAGCTTGTTGATTTCAATATATTGCATGTCGCAAACGCCTACGCAGGACAACCCGATGATGAAATATATGCCTTATATATTTCCCGTAATGCTTCTGGGTATCTTTAACGGGCTGCCTTCCGCCTTAACATGGTATTATACTGTTTCCAACGTTATTACACTTACTCTGCAGTACGTGATCCAGCATTTTATTATTGATCATGATAAGATCGTTGCCCAGTTGGAGCTGAACAAGAAAAAGCCTAAAACCAAGAGTAAATGGCAGGAGCGGCTGGAGCAAATGCAGGAAACCCAGAAAAAGCTCCAGGATAAAACAAAGACCAGGCAACAGGGGAAATAA
PROTEIN sequence
Length: 614
MQFDKNAIIGFVLLALMFLGFFYFTRTGQLEAEKQQKHIRDSIAALQPKIDTAAARLDSMHHEQQSRIAAAGQFQAAVNSVEKETTLETDVLKITFSNKGAQPKLVQLKKYKSIDSQDVKLVEEGFDKITYPVNTDANRTVQISDLYFEGGEALKNADGGQTLAYQLSDSSGRKIIHRFTLHPGNYMIDWNLEIEGAGSLLTQNSINFLWQNEVKQHEKDIVTEKRETQVGFWINNDYDYFTLGRTHEKQFENPLKWLSVKQKFFNTTLISKNNFNSGSINCSESHDSTGIITAATASLKMILPAGNVANVPLQIYYGPNDYTILKSYDMGLQNVINLGQGIYTFVKYINRWLVMPVFDFFKGFVGSYGLVIALLTIFIRVLTSPLLYKSYLSGAKMKALRPELDLLKAKFKDDQQGYAMEQMKVFRSAGVNPLGGCMPALLQIPIFFSLYSFFNSTIALRGQDFLWANDLSSYDSILTFGFNIPFYGNHISLFTLLATASSLLISIYCMSQTPTQDNPMMKYMPYIFPVMLLGIFNGLPSALTWYYTVSNVITLTLQYVIQHFIIDHDKIVAQLELNKKKPKTKSKWQERLEQMQETQKKLQDKTKTRQQGK*