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SCNpilot_cont_500_bf_scaffold_7967_7

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 5209..5652

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0VAI5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 143.0
  • Bit_score: 160
  • Evalue 1.90e-36
Putative cold shock protein {ECO:0000313|EMBL:GAO43832.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 147.0
  • Bit_score: 227
  • Evalue 1.70e-56
cold-shock DNA-binding protein family similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 143.0
  • Bit_score: 152
  • Evalue 1.20e-34

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 444
ATGGCAACAAGCTGGAATAAAAAAGAAAGAGAAAACAAGAAAAGAGAAGAGCGCAAAAAGAAAGAAGAAAAAAGACAGGAACGTAAAGAAAATGCCGGAAAAGGAAAAAGCCTCGATGAAATGATGGCTTACCTTGATGAAAACGGTAATCTTACTTCTGTTCCACAGGATAATAGGAAAAGAGTGGAGATCAGTTTGGACGAGATCGAGATTGGTGTCCCGAAGCAAAAAGAGTTGAGTCCTGAAGAATTGATACGTAAAGGCACTGTTACCTATTTTAACGGCGCAAAAGGATTTGGGTTTATAGAAGACAATGAAAACGGGCAACGTGTGTTCGTGCATCAATCTTCTTCCGGCTTTGCTTTACAGGAAGGGGTAAAGGTGACATTCGAAATAGAAAAGGGACCCAAAGGGTATACTGCAGTGAATGTTTCAAAAGGCTAG
PROTEIN sequence
Length: 148
MATSWNKKERENKKREERKKKEEKRQERKENAGKGKSLDEMMAYLDENGNLTSVPQDNRKRVEISLDEIEIGVPKQKELSPEELIRKGTVTYFNGAKGFGFIEDNENGQRVFVHQSSSGFALQEGVKVTFEIEKGPKGYTAVNVSKG*