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SCNpilot_cont_500_bf_scaffold_9455_4

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(2093..2470)

Top 3 Functional Annotations

Value Algorithm Source
LytTr DNA-binding region n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYH6_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 117.0
  • Bit_score: 122
  • Evalue 3.60e-25
LytTr DNA-binding subunit similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 117.0
  • Bit_score: 122
  • Evalue 1.10e-25
Chemotaxis protein CheY {ECO:0000313|EMBL:ETZ19683.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 119.0
  • Bit_score: 122
  • Evalue 3.90e-25

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 378
ATGCACGAAGAATCCCTGGTCATTGCTGAATCAATAGCAGCAGCTAACAGCCCTAAGCACGATTTTGTATTTATAAAATCGGAATATAAGATCATTAAAGTAAGGTTCGATGAAATATTGTTTTGCGAAGGAATGAAAGACTATACGCAAATATATATGAACGGCAGGCCTCAGCCGGTATTGACACTTCAGAACCTTAAGAATTTCAGCTCCCGGCTACCCGAAAGCGATTTTGTAAGGGTACATCGTTCTTATGTTGTTTCACTCAACCATATTGAAACGATATCCCGTAATGAAATATCTATCGGAAAAAAAGTCGTTCCGATAGGCAACAGCTACCGCAACGACTTTTTCAAAATTATTGAGCTATATTCCTGA
PROTEIN sequence
Length: 126
MHEESLVIAESIAAANSPKHDFVFIKSEYKIIKVRFDEILFCEGMKDYTQIYMNGRPQPVLTLQNLKNFSSRLPESDFVRVHRSYVVSLNHIETISRNEISIGKKVVPIGNSYRNDFFKIIELYS*