ggKbase home page

SCNpilot_cont_500_bf_scaffold_9550_5

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(4701..5654)

Top 3 Functional Annotations

Value Algorithm Source
RagB/SusD domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1K1_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 317.0
  • Bit_score: 426
  • Evalue 3.00e-116
  • rbh
Glycan metabolism protein {ECO:0000313|EMBL:AIZ65479.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 317.0
  • Bit_score: 431
  • Evalue 7.60e-118
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 317.0
  • Bit_score: 426
  • Evalue 9.40e-117
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hymenobacter sp. DG25B → Hymenobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 954
CCTCCTCCTGCAACAACAGATGCCATTTATACGCAGATCATCAGCGATCTTGATTTTGCCGCAGCTAATCTTCCCGACAGCTATGATCCGGGTAACGGCAGGGGACGTGCCACGAACGGCGCAGCCAATGCGTTGCTGGCAAAAGTATATCTTACACAAAAGCAATGGGATAAAGCCGCCACTGCTGCAAAAAAAGTAATTGATTCCAACCGGTATGCATTATGGGATGATTTTGCAGATGTATTCAAGCTCTCCAGCCGCAACGGAAAAGAAGCTATATTCTCCGTAGGGTTTGGAGATGCAGGCGGCGCTATCATATTCTGGGAAGCAGGCCAGTTTCAGGTAAGGCTTTTGCCTCCCGGCCTAAGCGTGGAAGGCGTAAAAAATGCGCAGGGCTGGCAGATCCCCACGGAATACTTATATAACCAGTACGATGCGGACGACAGGAGAAGAGCCGTAACTTTTATTACTGAGATCAATGACCCGGCTACCGGCCCGAAAACGATCAGGCCCTATATACAAAAATACTGGGACCGCGCTGCGGAGCCTACCGGTAATGAATCCTCAAACGAATTCCCGGTATTGCGCTATGCAGATGTATTGCTCATGTATGCAGAAGCCAATAATGAATTGGGACAGGCAGCTATCGCGGAAGAGTATATTAATAAGATAAGAAAGAGAGCGCGGTTTAATGGGACAGACTACCTGCCAACAGTGCCGGATTATGCAGGATTGTATAAAGATCAGATGCGCGATGCTATTATTAAGGCGCGGCTGCTTGAGTTTGTGGCGGAAGGGCAAAGATGGTTCGATCTTTCCCGTACAGGCACATTGATAGAGAAAGTGCCATTGGCCAAACCCGGCGTTACGCCGCAAAGTAAAAATTACCTGTTCCCGATTCCACAGAGGGAAATAGACCTGAACAATTCCCTGGAACAGAATACCGGGTATTGA
PROTEIN sequence
Length: 318
PPPATTDAIYTQIISDLDFAAANLPDSYDPGNGRGRATNGAANALLAKVYLTQKQWDKAATAAKKVIDSNRYALWDDFADVFKLSSRNGKEAIFSVGFGDAGGAIIFWEAGQFQVRLLPPGLSVEGVKNAQGWQIPTEYLYNQYDADDRRRAVTFITEINDPATGPKTIRPYIQKYWDRAAEPTGNESSNEFPVLRYADVLLMYAEANNELGQAAIAEEYINKIRKRARFNGTDYLPTVPDYAGLYKDQMRDAIIKARLLEFVAEGQRWFDLSRTGTLIEKVPLAKPGVTPQSKNYLFPIPQREIDLNNSLEQNTGY*