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SCNpilot_cont_500_bf_scaffold_10807_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(3014..3319)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Prevotella buccae D17 RepID=D3HYW2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 64.0
  • Bit_score: 69
  • Evalue 1.70e-09
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFC75581.1}; TaxID=575611 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccae D17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 64.0
  • Bit_score: 69
  • Evalue 2.40e-09
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 65.0
  • Bit_score: 67
  • Evalue 2.70e-09

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Taxonomy

Prevotella buccae → Prevotella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 306
ATGAAACCCAAAAGAAAACCCTCCCATCTGGTCATGAACAGGCTGGCCATTGTTTTAAAGGAAGAACGGGTCTCTAATAAGCATCTAGCAGAGGTGTTAGGTTACGAACCTGCAACCATTTCAAAATGGGCAACCAATACCATACAACCTCCGCTTGCTACCTTCTTCCGTATTGCACTCACTATTAATCGTGATCTGAAGGATTTTTTTATTTCATCTAAAGACATTGATGGAGAGGAGAAGAAAAAATTGCTTAAAGAGTTGGCGGTAATTGCGGAGAAAGGGAAAAGGACAGGGAAGAAGTAA
PROTEIN sequence
Length: 102
MKPKRKPSHLVMNRLAIVLKEERVSNKHLAEVLGYEPATISKWATNTIQPPLATFFRIALTINRDLKDFFISSKDIDGEEKKKLLKELAVIAEKGKRTGKK*