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SCNpilot_cont_500_bf_scaffold_12862_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 3146..3700

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:ETZ23903.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 178.0
  • Bit_score: 163
  • Evalue 2.20e-37
SusC/RagA family TonB-linked outer membrane protein id=1809404 bin=GWD2_Bacteroidales_45_23 species=Parabacteroides johnsonii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 181.0
  • Bit_score: 120
  • Evalue 2.00e-24
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 180.0
  • Bit_score: 112
  • Evalue 1.30e-22

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGAAATACTATACAATAAAAACTATACTGCTGTGCCTGACTGTATTGTTTACAGCGATGCAGCAAAATACTTTCGCACAAAGCGCTGCAATTACGCTTGCGGGTAAGGTTACAGATCAGTTCGGCAACCCGTTATATGGAGTGGCTGTTAATTCAGGAAATGGAGCGAATGGAACATCCACTGATAAAAAAGGAGCATATACCCTCCCTGTTGATGATGGCAGCACCACGCTCACGTTCACATATACCGGTTATTTGATTGCCACAGAAACTATTGGGGAAAAAGAAACCATCAATGTACAATTGCAGCCGGATGCACACAAATTAGATGAAGAAATACAATTAGGGTATAATAGCCAGCGCCGCAGGCATTTTGCAGGTGCGGCAGCAACGGTAACAGGGGCAGAGCTGGAAAGGGCGCCTGTAGCTAATTTCGGGCAAACCCTGGGAGGAAGACTACCCGGGCTTACTACCCTTGAAACATTTTCTGAACTATCTCGTGCTACTACGTCTATGGCAGTGAGGGGATTCAGCTTTGCACGCAATAACGGGCCA
PROTEIN sequence
Length: 185
MKYYTIKTILLCLTVLFTAMQQNTFAQSAAITLAGKVTDQFGNPLYGVAVNSGNGANGTSTDKKGAYTLPVDDGSTTLTFTYTGYLIATETIGEKETINVQLQPDAHKLDEEIQLGYNSQRRRHFAGAAATVTGAELERAPVANFGQTLGGRLPGLTTLETFSELSRATTSMAVRGFSFARNNGP