ggKbase home page

SCNpilot_cont_500_bf_scaffold_13322_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(2..1162)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035ECC57 similarity UNIREF
DB: UNIREF100
  • Identity: 29.6
  • Coverage: 247.0
  • Bit_score: 96
  • Evalue 5.00e-17
SusC/RagA family TonB-linked outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 24.6
  • Coverage: 415.0
  • Bit_score: 86
  • Evalue 2.80e-14
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CDE57302.1}; TaxID=1262936 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.1
  • Coverage: 288.0
  • Bit_score: 86
  • Evalue 1.20e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Prevotella sp. CAG:873 → Prevotella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1161
ATGAGACTAATCCCTAAACCGGGTGGAAAAGCTCTGCTTTTTCTTCTCGTATCTATTGGTGCTGTGATGAATGTGCTGGCCCAGGATTCTCTGAGAGTAGATAGCATGCTCTTATCCAACCGTAGCGGAGTGGAGAACATTCTCCAGGGAAGGGTAGCCGGATTAAGGATAAAGAGCTGGTCGGGTACTACAGGCGCTCAATCCACTTTGAATTTACGGGGCTTAAGCCTGGATCCGACAGACCAATCTACCATGCCCCTGATCCTTATTAATGGTGTGCCTATGATTGCCGGCCCTTCCAATATAACCGGCATCAATCCTCTCACTTATTTTTCTCCCGAACAGATCGAACGCATAGATGTAATTAAAGACATTGACCGTCTCGCCGCTTATCGCGTGCAGGCGCCCAACGGAGCGCTCAATATTATTATGAAAGAAGGAAAGCCCGGATCTATTCATGTTCGGGCCAATGCCTATGCCGGAGTAAATTTCCTGCAAAACATGGATTATAAGCGGGATGCCTTCTATGACTTTAATACGACAGCCCGCAGAGATGTATATGGTGACGGGGGGATGATAAACGACGAAACACTGCTGGTTGACGGAGCGGGTAGTTACGGCTCCTACCTGTTTGGGCTCTCCAATCACCAGGATAAAGGAATTATTAAAGGGTCAGGTTTCGGGCGTCAAAACTTATTTCTGAATGCGAAATATAATATTACCGATCGCTTTTCCGCTCATTTCTATAATAATATGACCCTCGCCAACCGCAACGGGCGATATACCGGGGAGTACAGCCGGGATTTAATCCTTCCCGTAGTTGGCAGTGAAGATTTCTTCATGGATAAGAACAGGAATCTTGGGTTGATATCCTCTATGGGATTGACTTACCTGCTCGATCATGGCATCACCATAAGCTCTGTAGGAAGTCTGTCTTATGAAGGTTCCAGCCGGGATATGTATATTCCCTCCAACCTGCTTGACGGAGATATTTATGCTTCGAGCGCCGCTTACAAAAGGCAATTGATCACCTGGAATACTTCTGTCAACTGGTTGCATGAATTTTCTGATGCGCTGAAAATGGATATGACGCTTGGCGGAGAGCTCAGAAATACAGATGACCGGCTCACCTCTGTTAACGGGCAACGCAGTCTGGAAAAC
PROTEIN sequence
Length: 387
MRLIPKPGGKALLFLLVSIGAVMNVLAQDSLRVDSMLLSNRSGVENILQGRVAGLRIKSWSGTTGAQSTLNLRGLSLDPTDQSTMPLILINGVPMIAGPSNITGINPLTYFSPEQIERIDVIKDIDRLAAYRVQAPNGALNIIMKEGKPGSIHVRANAYAGVNFLQNMDYKRDAFYDFNTTARRDVYGDGGMINDETLLVDGAGSYGSYLFGLSNHQDKGIIKGSGFGRQNLFLNAKYNITDRFSAHFYNNMTLANRNGRYTGEYSRDLILPVVGSEDFFMDKNRNLGLISSMGLTYLLDHGITISSVGSLSYEGSSRDMYIPSNLLDGDIYASSAAYKRQLITWNTSVNWLHEFSDALKMDMTLGGELRNTDDRLTSVNGQRSLEN