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SCNpilot_cont_500_bf_scaffold_14478_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 3..512

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 169.0
  • Bit_score: 297
  • Evalue 2.70e-78
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 169.0
  • Bit_score: 297
  • Evalue 1.20e-77
DNA-directed RNA polymerase subunit beta' n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7D5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 169.0
  • Bit_score: 297
  • Evalue 8.50e-78

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 510
ATCGTAGAGCCGGGAGATACCAAGTTCCTCGAAGAGGATCTTGAAGACAGGTTTGAGTTTATCGAGGAGAACGACTGGATATTCGATAAGAAAGTTGTTACAGATCCGGGTGATTCTGCCAAGATGCGCGCCGGCCAGATCGTAAGTCTGCGTGAACTGAGGGAAGAGAATTCCATTCTCCGCCGCAACGACAAGAAGCTGGTTGAGTTCCGTGATGCCAATACTGCCACTTCCAAGCCGGTATTGCTGGGTATCACCAAAGCATCGCTGGGTACGCATAGCTGGATATCTGCAGCGTCCTTCCAGGAAACTACAAAAGTGTTGAGCTCAGCAGCCATCCAGGGTAAAACCGATGATATGCTCGGGCTGAAGGAAAATGTAATTACCGGTCATCCGATACCGGCAGGTACAGGGCTTCGTGAGTTTGAGAACATGATCGTAGGCAGCAAGGAAGAGTACGAACTGTTGCAAACGGCCCGTGAAGCCATGAGCTTTGACGAAGAAGAATAG
PROTEIN sequence
Length: 170
IVEPGDTKFLEEDLEDRFEFIEENDWIFDKKVVTDPGDSAKMRAGQIVSLRELREENSILRRNDKKLVEFRDANTATSKPVLLGITKASLGTHSWISAASFQETTKVLSSAAIQGKTDDMLGLKENVITGHPIPAGTGLREFENMIVGSKEEYELLQTAREAMSFDEEE*