ggKbase home page

SCNpilot_cont_500_bf_scaffold_15217_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(1..363)

Top 3 Functional Annotations

Value Algorithm Source
xylose isomerase n=1 Tax=Dyadobacter beijingensis RepID=UPI00037EB730 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 114.0
  • Bit_score: 132
  • Evalue 3.40e-28
xylose isomerase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 118.0
  • Bit_score: 131
  • Evalue 2.40e-28
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT94913.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 118.0
  • Bit_score: 131
  • Evalue 1.10e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 363
GTGCAGGCAGCCTATAAAAAAGCCGCGGCAGCCTCCGGCATCGCTATATCAAGCCTGGCAATGGGATTGTTTAACCGGGTGCCGTTCCATGAGAATGAGCATACGGTGGAATGGATAAAAGATACTATTACGACTGCAAAAAGCCTGGATGTTAAAGTGATCCTGCTTGCATTTTTCAATGCCAGTGATCTCCGCAATGATGATGCGCGGAAGGCTATTGCGGTAAAACACCTTAGCGCGGTAATGCCCGCTGCAGAAGCCGCCGGTATAACGCTGGGTATAGAGTCTTACCTTAATGCTGCGGAACACCTTGATATTATGCACAAAGTAGGCTCAAAAAACCTGAAAGTATATTATGATTTC
PROTEIN sequence
Length: 121
VQAAYKKAAAASGIAISSLAMGLFNRVPFHENEHTVEWIKDTITTAKSLDVKVILLAFFNASDLRNDDARKAIAVKHLSAVMPAAEAAGITLGIESYLNAAEHLDIMHKVGSKNLKVYYDF