ggKbase home page

SCNpilot_cont_500_bf_scaffold_16863_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 3..1061

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382A239 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 342.0
  • Bit_score: 401
  • Evalue 8.70e-109
Contig119, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74997.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 338.0
  • Bit_score: 373
  • Evalue 2.70e-100
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 337.0
  • Bit_score: 365
  • Evalue 2.20e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1059
TTTTCTGTAACTTTAAAGAAATACGATTTTATGACACCGCGGAAGGTCACAATTATTGATATTGCCAAACGACTTAATATTTCGAAGTCTACGGTGTCCAGGGCGCTAAGCAACCATCATAGCATTGGGCTACGGACTAAAATGCGTGTAACGCAACTGGCATCAGAATTAAATTATGAACCTGACAACAGAGCGATCTTTTTTAAGCAACGTAAAACATATCTGATCGGCCTGATATTACCTTCCTTATCCAATACTTTTTTTGCATCCATAGTAAGCGGCGTTGAAGACGTAGCATATCAAAAAAAATACACACTGCTGCTTGGACAATCAAGAGATGACCAGGAAAGAGAAAAAAGTATTGTAGAAACAATGAAAAATCATCGCGTGGATGGCATGCTCGTATCTATTTCAAAAAGCACTACCAGTTATGAACATTTTAAACTACTGGAAAAAAACAATATACCCGTAGTATTTATTGACAGGATACCTGAAATGAAAAATATTCATTTTATAGCCTGCAAGCTGGAAAATGGTATGATAGAAGCCGTAAGTTTTTTAGTTAAACAAGGACATAAGATAATTGGATTGATTAACGGGCCTGAAAACTTTTCCGCCAGTAAGGAACGTTACAGCGCTTACCTGAAGGCGCTAAGGAAAAATAAAATAAAGCCCGATAAAAAATTAATTACCTGTTCCGATCTTACAATTGACGGGAATGTAGCAGCTTCAAAAAAGCTACTGGCACTCGCCAGGCGGCCAACTGCAATAATAACTTTTAATGACTATGTGGCCCTGGACGCAATAGACTACTGCAAACGGCAAAAGATAAGGATAGATAAGGATATAAGTTTTGTAAGTTTTGCCAATGAGGCTATTTGTAATTATATGGATCACCCTCCAATAGCATCGGTAGAACAATTTCCCTATCAGCAGGGGCAAAAAGCCACCGAAATGCTGATAGAGATTATTGAAAAAGCAAAACCGGAAAACGAAAATAAAAAGACGTTCAACAATTTATTACTGCAATCCCAGCTCGTTATCCGCGGAACCCATTAA
PROTEIN sequence
Length: 353
FSVTLKKYDFMTPRKVTIIDIAKRLNISKSTVSRALSNHHSIGLRTKMRVTQLASELNYEPDNRAIFFKQRKTYLIGLILPSLSNTFFASIVSGVEDVAYQKKYTLLLGQSRDDQEREKSIVETMKNHRVDGMLVSISKSTTSYEHFKLLEKNNIPVVFIDRIPEMKNIHFIACKLENGMIEAVSFLVKQGHKIIGLINGPENFSASKERYSAYLKALRKNKIKPDKKLITCSDLTIDGNVAASKKLLALARRPTAIITFNDYVALDAIDYCKRQKIRIDKDISFVSFANEAICNYMDHPPIASVEQFPYQQGQKATEMLIEIIEKAKPENENKKTFNNLLLQSQLVIRGTH*