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SCNpilot_cont_500_bf_scaffold_16633_5

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 2281..3066

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 171.0
  • Bit_score: 198
  • Evalue 2.60e-48
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000360839C similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 236.0
  • Bit_score: 200
  • Evalue 2.90e-48
Lytic transglycosylase catalytic {ECO:0000313|EMBL:AEW01832.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 171.0
  • Bit_score: 198
  • Evalue 1.20e-47

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 786
ATGAATAAGATGATCGTTAACGGCTTTGGTTGTGTGGCGCTTGTTTTTTTATGTTCTTTTCTTGTCCCTTCAACAAAGGGGTTGGGAAATGAGCTTAAAAATATGTCGGGATCAGATACAATTATCGCTTCAACTACTCCTTCAGCCATTATTGTAGCTGATGCAGGCAATATTCCTTCTTCAGAGAGCATTGTGATGCTTGCCAAGGAAAAGGAAGCCTCAAAGAATGTAAGTCTTGCAAAAACAATTACACTCAGGGAGAAGATGTTCAAAGAACTGCATCCCATGTCTATTGCTTTTGTTCAGGCTTACCAGCAAAAAAATGAAGACAATCTCGAAAAAATCAAAGTTAAATATGCTCCTCAGCTGACCATTATTGACAATATTCTGCTCCAGCATGAGCTTCCTACCAATTTAAAATACCTGGCAGTAATTGAATCGGAGCTATCCAATTCGGCCATATCTCACAAAGGAGCGGTAGGACCCTGGCAGTTTATGGCTACCACCGGAAGACTGATGGGGCTTACCATTAACCGGAACAAAGACGAAAGAAGGAACCTGGTAAAGAGCACTCATGCCGCCGCCAAATACCTTAAAGATTTATATGGGCATTTTAACGACTGGCTATTGGTAATTGCTGCATATAATGGCGGCGCCTCCCGGGTAGATTATGCTATCAAAAAAAGCCATAGCGACGATTTCTGGAAGCTGCAGTATTACCTGCCCGCTGAATCAAGAATGCATGTAAAGAAATTTATTGCCACCCAATATGTACTTGAAGCTACC
PROTEIN sequence
Length: 262
MNKMIVNGFGCVALVFLCSFLVPSTKGLGNELKNMSGSDTIIASTTPSAIIVADAGNIPSSESIVMLAKEKEASKNVSLAKTITLREKMFKELHPMSIAFVQAYQQKNEDNLEKIKVKYAPQLTIIDNILLQHELPTNLKYLAVIESELSNSAISHKGAVGPWQFMATTGRLMGLTINRNKDERRNLVKSTHAAAKYLKDLYGHFNDWLLVIAAYNGGASRVDYAIKKSHSDDFWKLQYYLPAESRMHVKKFIATQYVLEAT