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SCNpilot_cont_500_bf_scaffold_18472_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(2934..3506)

Top 3 Functional Annotations

Value Algorithm Source
carbohydrate-binding protein SusD n=1 Tax=Spirosoma panaciterrae RepID=UPI000368CC80 similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 191.0
  • Bit_score: 295
  • Evalue 3.60e-77
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:AKD57631.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 191.0
  • Bit_score: 290
  • Evalue 1.60e-75
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 191.0
  • Bit_score: 280
  • Evalue 5.00e-73

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Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
AGAACCAATGGTGCATTTGAAAAATGCCCTAACGGTGATTTTAAAGTGGGCAAACTGTATAATGTTACCCGGAACCGTCCCGACTTACCGGTATTCTTTACCGAGCAGATCGATTTTTTAGACTACAGCAATTACAACAATGGCTTTCGTGTAGAGAAATATGAATTCAGCCGTGGTTCCTCTAGCGGAAGAAATTTCGGAGAGCATGATATAGTTATCTTACGGCTTGCGGATATTTACCTCATGCGTGCAGAAGCAAAGCTCCGCAAAAGTTCAGGCAATGAAGCTGCTGCACTCGCTGATGTAAATACGGTACGTGCTGCCAGAACTGCCAGAATAGTTCCGCCTGCACTTACCGAAATGAATCTTGACCTGCTATATCGCGAAAGAGGATTCGAGCTCTATTGGGAAGATGTGCGCCGTACCGATATGATCCGCTTCGGAAAATATGAAGGTACATGGACAGAGAAAAATAACTCAGACACTAAAAAAAGAATTTTCCCCATTCCGCAGAATGCTATTGACGGGGCTTCGAATTTGCCCGGTTACCTGATACAGAATGAAGGCTATTAA
PROTEIN sequence
Length: 191
RTNGAFEKCPNGDFKVGKLYNVTRNRPDLPVFFTEQIDFLDYSNYNNGFRVEKYEFSRGSSSGRNFGEHDIVILRLADIYLMRAEAKLRKSSGNEAAALADVNTVRAARTARIVPPALTEMNLDLLYRERGFELYWEDVRRTDMIRFGKYEGTWTEKNNSDTKKRIFPIPQNAIDGASNLPGYLIQNEGY*