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SCNpilot_cont_500_bf_scaffold_19525_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(1614..2312)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAR0_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 235.0
  • Bit_score: 315
  • Evalue 5.40e-83
  • rbh
Putative two-component response regulator {ECO:0000313|EMBL:GAO41941.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 232.0
  • Bit_score: 322
  • Evalue 3.60e-85
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 235.0
  • Bit_score: 315
  • Evalue 1.70e-83
  • rbh

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 699
ATGAGATGTATAGCAGTAGATGATGAACCACTCGCCCTGCAGTTGCTGGAAGACTATGTCAGCAAAGTGCCTTACCTGCACTTAGTGGCTACCTGCAGCGATGCGTTTGAAGCCAATAAAATTTTGCAAGAACAACCGGTAGATCTTGTATTTATTGATATACAAATGCCCGGACTGACGGGTGTGCAATTTATCAGGAGTCTGGCCCAAAGACCCATGTTCATCCTGGTCACTGCCTATGAAAAATTTGCGCTCGAAAGCTATGATCTGAATGTGGTAGATTATTTGCTTAAGCCGGTAGAGCTGTCGCGTTTCATCCAGGCCTGCAACAAAGCAAATGAGCTGTTCCAATTGAAACATAAACAGGAAACTGTGCCACAGGATTATTTTTTCCTGAATGCAGACTATAGCCTGATAAAAGTGATGTTTGCCGATATCTTATGGGTAGAAGGACTCCGCGATTATATAAAAATTCATCTGGCACCTCCGGCAAAGCCGCTGGTAGCAAGGTTGAGCATGAAAGCCATTGAAGACGAGCTGCCTCCTTCGAAATTTATCCGCATCCACAAATCATATATCATTTCCGTTGATCACATCAGCTCGGTAAAAAAAAGCAGCGTATTCGTGGGTGATGCGGAGCTGCCTGTAGGCGAAATGTATAAAGAGAATATTGAGGCGCTTACGGGTCGCAAACGCTGA
PROTEIN sequence
Length: 233
MRCIAVDDEPLALQLLEDYVSKVPYLHLVATCSDAFEANKILQEQPVDLVFIDIQMPGLTGVQFIRSLAQRPMFILVTAYEKFALESYDLNVVDYLLKPVELSRFIQACNKANELFQLKHKQETVPQDYFFLNADYSLIKVMFADILWVEGLRDYIKIHLAPPAKPLVARLSMKAIEDELPPSKFIRIHKSYIISVDHISSVKKSSVFVGDAELPVGEMYKENIEALTGRKR*