ggKbase home page

SCNpilot_cont_500_bf_scaffold_19156_4

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 2380..3063

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEQ8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 230.0
  • Bit_score: 283
  • Evalue 2.20e-73
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 230.0
  • Bit_score: 283
  • Evalue 7.00e-74
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW00494.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 230.0
  • Bit_score: 283
  • Evalue 3.10e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 684
ATGAAACTTTTGGTCATAGAAGACGAACGGGATCTTTCCGACAGCATTTATGCTTACCTGGAGAAACAGCAATTTATTTGTGACACAGCTTACGATTATTATGAGGCCCTGGATAAAATATCGCTGAATGAATACTCCTGTATCATCCTTGACATTATGCTGCCGCATGGAAGCGGGCTGCAATTGCTGAAAATACTGAAAAAACAAAAAAAGACAGACGGAGTACTTATTATCAGTGCGAAAAATTCGTTGGAAGACAAAGTAGAAGGTTTGCAGATAGGTGCGGACGATTACCTGGCAAAGCCGTTCCACCTCGCCGAACTGGGTGCGCGTGTCGCTGCGATCATAAGGCGGAGATCATTTTATGGGCAGACCCGGATTGAACTGGACAGTTTGGTGCTTGATCTCTCTGATCGAACCCTGAGAGGGCCTCATGATGAAGAAATCCCTCTTACTCGGAAAGAATACGATCTCCTGATATATTTTGTCAGCAATAAAAACAGGGTAGTTACCAAAGAAGCGATCGTTGAGCATCTTTGGGGAGAAGGTATTGATATGGCATATAGTTATGACTTTGTTTACTCCCACATAAAAAACCTTCGTAAAAAGCTCCTGCAAGCCGGTTGCCCGGATTATATCAAGGCTGTATATGGCATGGGATACAAATTTACCATTGCAGGTTAG
PROTEIN sequence
Length: 228
MKLLVIEDERDLSDSIYAYLEKQQFICDTAYDYYEALDKISLNEYSCIILDIMLPHGSGLQLLKILKKQKKTDGVLIISAKNSLEDKVEGLQIGADDYLAKPFHLAELGARVAAIIRRRSFYGQTRIELDSLVLDLSDRTLRGPHDEEIPLTRKEYDLLIYFVSNKNRVVTKEAIVEHLWGEGIDMAYSYDFVYSHIKNLRKKLLQAGCPDYIKAVYGMGYKFTIAG*