ggKbase home page

SCNpilot_cont_500_bf_scaffold_20715_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 833..1738

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK39_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 304.0
  • Bit_score: 457
  • Evalue 1.10e-125
  • rbh
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 304.0
  • Bit_score: 457
  • Evalue 3.60e-126
  • rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 301.0
  • Bit_score: 463
  • Evalue 2.90e-127

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 906
ATGGAAAATAGCACTTCATTGCAGCAGCAATTACTGGAAGCAGGTGTTCACTTTGGTCATCTGCGTAAGAAGTGGAACCCAAAAATGTTGCCTTACATTTTTGCTGAAAAGAAAGGCATCCATATCATTGACCTCAACAAAACTGTTGAAAACCTTCAGGAAGCAGCCGCAGCATTAAAAACCATTGCCAAAAGCGGCAAGAAAATAATGTTTGTAGGCACTAAAAAGCAGGCTAAGGAAATTGTGACGGAATGTGCGAAAAAAGTAAACATGCCTTATGTTACCGAAAGATGGCTTGGCGGCATGCTTACCAACTTCAACACTGTTCGTAAGAGCGTAAAGAAAATGCAGAGCATCGAAAAAATGCTTAACGACGGCACTTTCGACAGCATTACCAAGAAAGAGCGTCTTACGCTTAGCCGTGATAAAGAAAAAATGGAAAAAGTGCTCGGCGGTATTGCCCAGTTAGGGCGCGTGCCTGCGGCATTATTTATCGTTGATATAGGCCATGAGCATATTGCACTTTCCGAAGCCAAGAGACTGGGTGTATCAACATTCGGCATGGTAGATACCAACTGCGACCCCAATAAGGTAGACTTCTCCATTCCTGCCAATGATGATGCTACCAAATCAATAGCTATCATTACCAATTATATTACAGCAGCTATTGCCGAAGGGCTTGCAGAACGCCAGAACGAAAAAGCGGAAGAAGAAACAGAAGAGGAAGTAGTAGAAAAGAACCCCAGGCTTGATATAGATGAAGGCGCTCCTGAACGCGAAAAAGGCGGCAGAGGCAGCGGACGTGGACCGGGAAGAGGAACAGCAGCAGGTGGAGGCGGCGGCCAGAGAAGGCGCACTCCATCCGGAGGTGGCGGAGCAAGACGCCCTGCCGGTGGCGGTCGCTAA
PROTEIN sequence
Length: 302
MENSTSLQQQLLEAGVHFGHLRKKWNPKMLPYIFAEKKGIHIIDLNKTVENLQEAAAALKTIAKSGKKIMFVGTKKQAKEIVTECAKKVNMPYVTERWLGGMLTNFNTVRKSVKKMQSIEKMLNDGTFDSITKKERLTLSRDKEKMEKVLGGIAQLGRVPAALFIVDIGHEHIALSEAKRLGVSTFGMVDTNCDPNKVDFSIPANDDATKSIAIITNYITAAIAEGLAERQNEKAEEETEEEVVEKNPRLDIDEGAPEREKGGRGSGRGPGRGTAAGGGGGQRRRTPSGGGGARRPAGGGR*