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SCNpilot_cont_500_bf_scaffold_24154_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 1549..2142

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035CED18 similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 203.0
  • Bit_score: 171
  • Evalue 8.20e-40
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 187.0
  • Bit_score: 158
  • Evalue 1.70e-36
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ACU03595.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 187.0
  • Bit_score: 158
  • Evalue 7.70e-36

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 594
ATGCCTGCCCAAATCAACCCTGAAGAAAGTGAATTGCTGTATCTGGTACAGTCAGATGACGAAAGCGCTTTCAGAACCATCTATATAATGTATAGCCCGCGATTGTACAAAAATATCCTGCGTTTTGTAAGGATAGAAGAGGTTGCGCAGGACCTTTTGCATGATCTTTTTATTAAAGTTTGGGATAAGCGACATACGATCGATCCTCAAAAGCCTTTTAAAGCCTTCATCTTTAAGATTGCAGAAAACCTGGTATACGATTTTTTCCGGAAAGCGTCGCGGGAAAGAGATCTTAAAAACATGCTTCTCACACAATATCATTTTATTCAACCGGCTTTGAACGAAATACCTGTGGATGATAAATATGCCTCGCTTTTACACGCAGCCGTTGAAACACTTTCTCCTATCCGCAAAAAGGTTTTTGAGCTGTGCAAATACGAGAAAAAATCGTATGAAGAAGCTGCGGTGATCATGGGCATTTCCAAAGCTACTGTAAGTGATCACATGGTTAAGGCTACCAAAGCCATCAGGCATTTTTGCATGAAACAGCCGGAATCCTTCTCTGCATTGGCAGTTGCCGTTTCACTGTTGTAA
PROTEIN sequence
Length: 198
MPAQINPEESELLYLVQSDDESAFRTIYIMYSPRLYKNILRFVRIEEVAQDLLHDLFIKVWDKRHTIDPQKPFKAFIFKIAENLVYDFFRKASRERDLKNMLLTQYHFIQPALNEIPVDDKYASLLHAAVETLSPIRKKVFELCKYEKKSYEEAAVIMGISKATVSDHMVKATKAIRHFCMKQPESFSALAVAVSLL*