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SCNpilot_cont_500_bf_scaffold_25740_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(1123..1692)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=2 Tax=Sphingobacterium spiritivorum RepID=C2FTN4_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 188.0
  • Bit_score: 152
  • Evalue 5.00e-34
RNA polymerase {ECO:0000313|EMBL:KIA96510.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 188.0
  • Bit_score: 158
  • Evalue 7.40e-36
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 188.0
  • Bit_score: 144
  • Evalue 4.20e-32

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
TTGAAGCAATATCACAGATATTCGGATAAAGAGTTAATAGATCTTGTAGCAGAAGATAATGAGGCTGCTTTCAGGGAATTATATGAAAGGTATTACAAAAGGCTGCTTGTTTTTGCCTTTGCAAAAACTGATAATTACGGTGATGCAGAGGAAATTGTGCAAATTGTTTTTGTAAACCTCTGGCAGAGAAGAAGCTCAATAAAACTTAAATACAGTTTTCATACCTATATTGCTGCAGTAACCAAATATGAAATTCTTGCGTTTTTTGCCAGTAAAAAAAGACAGGATACACTTAAAAAGAATGCATTCAACAGTTACAATCTCCCCGATAGTGCTCCTGGTAATTTCCTGACTTTTAATCAATTACGGGACGAAATTGAAAAAACCGTGAGGCTTCTTCCCGAGAAATGCAGGCTTGTTTTTCGTTTGAGCCGCGAAGAAGGACTGACAGAAAAAGAGATATGCCGGGCGCTTGATATAGCTCCCAAAACAGCGCAGGCACATTTGAGTAAGGCACTTCGTGTTATTCGCTCCTCTCTGAACCATATAATGCAGGCGGTTTTTTTATAG
PROTEIN sequence
Length: 190
LKQYHRYSDKELIDLVAEDNEAAFRELYERYYKRLLVFAFAKTDNYGDAEEIVQIVFVNLWQRRSSIKLKYSFHTYIAAVTKYEILAFFASKKRQDTLKKNAFNSYNLPDSAPGNFLTFNQLRDEIEKTVRLLPEKCRLVFRLSREEGLTEKEICRALDIAPKTAQAHLSKALRVIRSSLNHIMQAVFL*