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SCNpilot_cont_500_bf_scaffold_29546_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(1465..1992)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Pedobacter arcticus RepID=UPI000306DBEA similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 173.0
  • Bit_score: 148
  • Evalue 8.70e-33
Outer membrane efflux protein {ECO:0000313|EMBL:KGL59792.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.1
  • Coverage: 171.0
  • Bit_score: 147
  • Evalue 2.10e-32
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 171.0
  • Bit_score: 145
  • Evalue 1.80e-32

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Taxonomy

Polaribacter sp. Hel1_33_49 → Polaribacter → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 528
ATTAAAGCCCTGGATGAAGGTATTGCCGCAACCCGGTATATGCAAAAAGCTGCCCTGGCAGATTATGTGCCCAAAGTAGCCGCATTCGGACAATATGAACTAAGGGATAAAGATCTTTCACTGCTCGACCCGGTTTGGTATGCCGGCGTCAGGCTGCAGTGGAATCTTTTTGATGGCTTTGCTGCAAGAAATAATGCCAGGAAAGCCCAGCTCCAAAGACAGCAACTGGAAGTGCAGAAAAAAGCTGCACAGGATATGATAACGCTGGGGCAGGATAAATTGAGAGAAGATTACCTGCTGGCAACCCAAAAACTTACTTTAAAGCAGGCAGAAATAAAGTTGACAGAAGACACTTATGATTTTGTAAATAAACAATATCAAAACGGGCTTTCTTCTTTAAACGACGTGCTGGATGCAATGAACGACATTGAAAAATCAAAGTTCGATTATCAGCAGGCGCTGTACGAGCAACGCCAGGCAGGCCTAAAAGCCGCAGATATAAATGGCACTTTATTGAATAACCTGTAG
PROTEIN sequence
Length: 176
IKALDEGIAATRYMQKAALADYVPKVAAFGQYELRDKDLSLLDPVWYAGVRLQWNLFDGFAARNNARKAQLQRQQLEVQKKAAQDMITLGQDKLREDYLLATQKLTLKQAEIKLTEDTYDFVNKQYQNGLSSLNDVLDAMNDIEKSKFDYQQALYEQRQAGLKAADINGTLLNNL*