ggKbase home page

SCNpilot_cont_500_bf_scaffold_28005_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(3..422)

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 140.0
  • Bit_score: 233
  • Evalue 1.20e-58
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 140.0
  • Bit_score: 238
  • Evalue 5.40e-60
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 140.0
  • Bit_score: 233
  • Evalue 3.90e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 420
ATGTTTGAATCACTTTCAGAACGGTTGGATTCCGCCTTTAAGCAGATAAAGGGAGAAGGAAGGATTAATGAATTGAATATTGCCAACACGGTAAAAGATATACGCCGTGCCCTGGTAGATGCAGACGTAAACTACAAAATCGCCAAAGATTTTACAGATACCGTTAAAGCCAAAGCATTAGGAGAAAAAGTATTAACGGCGGTAAGCCCTGGTCAGTTGATGGTCAAGATCGTGAAAGATGAGCTGGCCGCATTGATGGGAGGCACGGAAAGTGAGTTTAATATCAATGGCAACCCGGCGGTGATCCTCATTGCAGGGCTGCAGGGAAGCGGTAAGACGACCTTCAGCGGTAAGCTCGCCAGTTATCTTAAGACAAAAAAAGGAAAATCTCCCCTGCTGGTAGCAGCAGACGTGTACCGC
PROTEIN sequence
Length: 140
MFESLSERLDSAFKQIKGEGRINELNIANTVKDIRRALVDADVNYKIAKDFTDTVKAKALGEKVLTAVSPGQLMVKIVKDELAALMGGTESEFNINGNPAVILIAGLQGSGKTTFSGKLASYLKTKKGKSPLLVAADVYR