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SCNpilot_cont_500_bf_scaffold_28005_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(606..1331)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 230.0
  • Bit_score: 379
  • Evalue 1.90e-102
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 228.0
  • Bit_score: 386
  • Evalue 2.80e-104
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 230.0
  • Bit_score: 379
  • Evalue 5.90e-103

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 726
ATGAGCATGCGTCAACTCAAAATCACGAAATCAATCACGAATCGTGAATCTCAAAGCCTTGAAAAATATCTGCAGGAAATAGGCCGTGTAGAATTGATAGGTTCCGAGGAAGAAGTAAAGCTTGCAGAGATGATCAAGCAGGGTGACCAGAAAGCGCTGGACAGGCTTACCAAAGCAAATCTCCGCTTCGTGGTATCAGTGGCAAAACAGTATCAAAACCAGGGGCTTTCCCTTCCAGACCTGATCAATGAGGGCAATTTCGGGCTGATCAAGGCTGCCCAGCGTTTTGATGAAACCAGGGGCTTTAAGTTCATATCTTATGCCGTGTGGTGGATCAGGCAAAGCATCCTGCAGGCACTGGCAGAACAATCAAGAATAGTAAGGCTGCCGCTGAATAAAGTAGGGCTCACCAACCGCATTAATAAAGCATTTCAGCAACTGGAGCAGGAGTATGAGCGCGAGCCGTCGCCTGAAGAACTGGCGGAAATGCTCGAAATAGACTCCGATGAAATAGCCGCTACCCTTGGTGTGGCTGCAAGGCATGTGAGCATGGACACACCGCTTTCGGAAGGCGAGGACGGCACACTGGTAGACGTGATGGAAAATCCTAATGCCGACAGTGTAGACGAAAAAATAGCGCATCATGAATCACTGAAAAAAGAGATTGAACGGTCGCTGCATACGCTTNNNNNNNNNNNNNNNNNNNNNNNNNCAGATAAAAGATAA
PROTEIN sequence
Length: 242
MSMRQLKITKSITNRESQSLEKYLQEIGRVELIGSEEEVKLAEMIKQGDQKALDRLTKANLRFVVSVAKQYQNQGLSLPDLINEGNFGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNKVGLTNRINKAFQQLEQEYEREPSPEELAEMLEIDSDEIAATLGVAARHVSMDTPLSEGEDGTLVDVMENPNADSVDEKIAHHESLKKEIERSLHTLXXXXXXXXXDKR*