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SCNpilot_cont_500_bf_scaffold_29906_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(1207..1746)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=2 Tax=Bacteroidetes RepID=F0S649_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 179.0
  • Bit_score: 285
  • Evalue 2.70e-74
Regulator with DNA binding domain protein {ECO:0000313|EMBL:CDT31694.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 179.0
  • Bit_score: 291
  • Evalue 7.00e-76
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 179.0
  • Bit_score: 285
  • Evalue 8.60e-75

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Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 540
ATGGTTTGCGATCGCTGTATAATGGTGGTGCAAAACGAGATGGATAAGCTTGGCATAGGTGTAAAGCATATTACATTAGGAGAGGTTACCCTTGAAAAAGCATTGCCCGATGAACAGAAAGAACGGGTAAGCAAAGCTTTGCTGCCCCTGGGTTTTGAGCTGATTGACGACCGTAAGAGCAGGATCATCGAAAAAATAAAGCGCATTATCATAAGCCTGGTACATCACCAGAACAGTGAGATAAGCAATAATCTTTCTGATATCCTGAGCAGGGAATTGCATCACGATTATAATTATTTGTCCAACTTATTTTCTGAAGTGGAAGGCAAGACCATCGAAAAGTATTTTATTGCCCAGAAAATTGAAAGGGTAAAGGAATTACTGGTTTATGATGAATTGTCGCTTAGCGAAATTGCTTTCCGCCTGAATTATTCAAGTGTGGCTTACCTGAGCAACCAGTTTAAGAAAGTAACAGGGCTTACACCCAGCCATTTCAGGCAGATCAAAGAGGGTAAAAGAAAGCCATTGGACAAAGTGTAA
PROTEIN sequence
Length: 180
MVCDRCIMVVQNEMDKLGIGVKHITLGEVTLEKALPDEQKERVSKALLPLGFELIDDRKSRIIEKIKRIIISLVHHQNSEISNNLSDILSRELHHDYNYLSNLFSEVEGKTIEKYFIAQKIERVKELLVYDELSLSEIAFRLNYSSVAYLSNQFKKVTGLTPSHFRQIKEGKRKPLDKV*