ggKbase home page

SCNpilot_cont_500_bf_scaffold_35196_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 2..616

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NKY9_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 204.0
  • Bit_score: 134
  • Evalue 1.50e-28
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB46937.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 167.0
  • Bit_score: 134
  • Evalue 1.60e-28
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 209.0
  • Bit_score: 111
  • Evalue 2.50e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides sp. HGS0025 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 615
AACCTCAAAGACGGGAAACTTGGAGAACCCAATGGTATCTTGCAGGGCGATGGCGACAGAACATGGATCATTGACCGCCTGATACCACCTTATACGTATGGTTTGCAGTTAGGAGCCAATTGGAAAAACATTTCACTGGATGTGATGCTGCAAGGCACGGCCGGCAATCAAAATTTCCTCCATTCCAACAATAACCTTGAATCGGGCGCCCGCGGTTCATCGTACGAATGGTATACGGCTAATGCGTATTCCTACCTCGAAACCCCGGATGGTATATACCCGCGAATGAATAACACTTCATCCAGTGCCGCTAGTTCAGATTTTTGGGTGCGCGATGCTTCGTTCCTGCGCCTAAAAAATGTAACGATTTCCTACGATATATCTAAAAAAACGTTGGAGAAGATTGGCCTCTCACAGGCAAGGATTTACCTCACAGGCAATAATCTTGCGTTGTTGTGGAACCCGATGAAGTATTATGATCCTGAAACAACTGGTACTGCCGGCGACTCAAACCCTATCAGTTCAGGCAGCTCCGGTAATTACCAATACCTGTCGGGCATAACAACTTACCCAATGGTGCGTACTGTAACTTTTGGTGTAAATCTTAGTTTTTAG
PROTEIN sequence
Length: 205
NLKDGKLGEPNGILQGDGDRTWIIDRLIPPYTYGLQLGANWKNISLDVMLQGTAGNQNFLHSNNNLESGARGSSYEWYTANAYSYLETPDGIYPRMNNTSSSAASSDFWVRDASFLRLKNVTISYDISKKTLEKIGLSQARIYLTGNNLALLWNPMKYYDPETTGTAGDSNPISSGSSGNYQYLSGITTYPMVRTVTFGVNLSF*