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SCNpilot_cont_500_bf_scaffold_33722_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 3..1793

Top 3 Functional Annotations

Value Algorithm Source
Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GY07_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 596.0
  • Bit_score: 854
  • Evalue 6.40e-245
multidrug resistance protein AcrB/AcrD/AcrF family protein; K07239 heavy-metal exporter, HME family similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 596.0
  • Bit_score: 854
  • Evalue 2.00e-245
Cobalt-zinc-cadmium resistance protein CzcA {ECO:0000313|EMBL:KHJ38223.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 597.0
  • Bit_score: 854
  • Evalue 6.80e-245

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1791
GCCTCGGTTATCCCGCTGTCCATGCTGTTTGCCATTATCCTGATGAACACCTTTGGCGTGAGCGGCAACCTGATGAGCCTGGGTGCTTTGGACTTTGGGTTGATTGTGGACGGTGCGGTCATTATCGTGGAAGCCGTCATGCACAAGCTGTCACACAGTAAGCGGTTCAGGAATGTAAACAACCTTTCCCAGCCCGAAATGGACAAAGAAGTACAGGTTTCCGCATCGGGAATGATGAACAGTGCTGTTTTCGGGCAAATCATCATTCTCATCGTTTACCTGCCCATTTTTACGCTGGAGGGTATTGAGGGCAAAATGTTCAAGCCAATGGCGCAGACAGTAGCCTTTGCCCTGCTCGGTGCATTCATCCTTTCGCTCACCTATATCCCTATGATGAGCACCTTGTTTTTGAGTAAGAAAATCACGCACAAACAAACGCTTTCGGACAGAATGATGAACCGTTTGGAACGGTTCTTTCAAAAATACTTGTCCAAAGTACTGCGCTACCAAAAAGTGGTGCTTGCAGCCGTTTTGGGCTTGTTTGCGACGGCGGTTTTTGTGCTGACCACACTCGGCGGCGAGTTTATCCCGTCTTTGCCCGAAGGCGATTTTGCCGTGGACACAAGGGTGTTGCCGGGCAGCAACCTGAACACGTCCATTGAGGCGGTTTCCAAAGCATCCAAAATCCTCCTTAAAAAATTTCCTGAAGTGGAAAAAGTGGTAGGCAAAACCGGGAGCAGCGAAGTGCCTACCGACCCGATGGCAGTAGATGCCTCGGACATGATGGTCATCCTGAACCCCCGCAGGGGATGGACCTCCGCAAAAACCTATTCCGAACTGGAAGCCAAAATGTCAAAAGCGTTAGAAGACGTTCCGGGCGTTTCGTTCGGCTTTCAGTATCCCGTAGCAATGCGTTTCAACGAGCTGATTTCGGGGGCAAGGCAGGATGTAGTCTGTAAGATATTTGGTGAGAATTTGGACACGCTGGCGGTATATGCCAATAAACTTGGCAAAATCTGCAACACAGTAACCGGAAGCGAGGCCTTGTATGTGGAAGCCGTAACGGGTATGCCGCAGATTGTAGTAAAATACAACCGTGCCGCCATTGCCCAATATGGCATGAACATCAGCGACATTAACCGTGTAGTGAATGCTGCATTTGCAGGCGAAAGCAGCGGTATGGTGTACGAGGGCGAAAAACGGTTTGACCTGGTGGTGCGGCTGGCGGGCGACAAAAGGAAAAAACTGGAAGACGTGCGGAACCTTTTGGTGGCAGCCCCGCAGGGTACGCAAATCCCTTTAAGCACCGTAGCTGCCGTGAACATTATTGAAGGCCCCAACCAGATACAGCGTGAAAATTCGCAACGCCGGATTATTGTGGGCTTCAACGTCCGTGGCAGGGACATCCAAAGCTCTGTCCACGAATTGCAGCAGAAAGTAGAGCAGCAGATAAAACTGCCGCCGGGTTATTACATCACTTACGGTGGTGCTTTTGAAAACCTGGAAGCAGCCAAACAGCGTTTGTACGTGGCGGTTCCGGTTTCATTAGCGCTGATTTTCCTGTTGTTGTTCTTTGCGTTCCGTTCTATTAAGCAGGGCTTGCTTATTTACACGTCCATACCGCTTTCGGCTATCGGGGGCATTTTCGCATTGGCGATAAGGGGTATTTCGTTCAGTGTGAGTGCAGGTATCGGCTTTATCGCTTTGTTTGGTGTAGCCGTGCTGAACGGCATTGTACTGTTGAGCGAATTTAACCGCCTGAGGAAAGAGGGCTACACCGATTTGAAACGT
PROTEIN sequence
Length: 597
ASVIPLSMLFAIILMNTFGVSGNLMSLGALDFGLIVDGAVIIVEAVMHKLSHSKRFRNVNNLSQPEMDKEVQVSASGMMNSAVFGQIIILIVYLPIFTLEGIEGKMFKPMAQTVAFALLGAFILSLTYIPMMSTLFLSKKITHKQTLSDRMMNRLERFFQKYLSKVLRYQKVVLAAVLGLFATAVFVLTTLGGEFIPSLPEGDFAVDTRVLPGSNLNTSIEAVSKASKILLKKFPEVEKVVGKTGSSEVPTDPMAVDASDMMVILNPRRGWTSAKTYSELEAKMSKALEDVPGVSFGFQYPVAMRFNELISGARQDVVCKIFGENLDTLAVYANKLGKICNTVTGSEALYVEAVTGMPQIVVKYNRAAIAQYGMNISDINRVVNAAFAGESSGMVYEGEKRFDLVVRLAGDKRKKLEDVRNLLVAAPQGTQIPLSTVAAVNIIEGPNQIQRENSQRRIIVGFNVRGRDIQSSVHELQQKVEQQIKLPPGYYITYGGAFENLEAAKQRLYVAVPVSLALIFLLLFFAFRSIKQGLLIYTSIPLSAIGGIFALAIRGISFSVSAGIGFIALFGVAVLNGIVLLSEFNRLRKEGYTDLKR