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SCNpilot_cont_500_bf_scaffold_37281_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 3..1655

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 551.0
  • Bit_score: 1002
  • Evalue 4.20e-290
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2 similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 551.0
  • Bit_score: 1002
  • Evalue 1.90e-289
DNA-directed RNA polymerase subunit beta' n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG7_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 551.0
  • Bit_score: 1002
  • Evalue 1.30e-289

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1653
GAAGCGATAGATTCTCTCTTTGATAACTCACGTAAGTCAAACGCCGTAAAAGCAGAAGGCGGGCGTGCGTTGAAATCACTGAGCGATGTGCTGAAAGGAAAACAGGGTCGTTTCCGCCAGAACCTGTTGGGTAAACGTGTTGACTACTCCGGTCGTTCCGTAATTGTGGTTGGTCCTGAATTGAAGCTGCATGAGTGTGGGTTACCGAAAGATATGGCTGCGGAATTGTTCAAGCCATTTATCATCCGCAAGCTCATTGAAAGAGGGATAGTGAAAACGGTGAAGAGCGCAAGAAAGCTTGTTGACCGTAAAGAAGCTATTGTTTGGGATATTCTTGAAAATATATTGAAAGGGCATCCGGTGATGTTAAACCGTGCCCCGACGCTGCACCGTTTGTCTATTCAGGCCTTCCAGCCAAGGCTGGTAGAGGGCAAGGCGATACAGTTGCACCCGCTCGTATGTTCTGCGTTCAACGCCGACTTCGATGGCGACCAGATGGCGGTGCACGTTCCGTTGAGCAGCGCTGCGATTCTTGAAGCGCAGTTGCTCATGCTTTCTTCCCACAACATTCTCAACCCGCAGAATGGTACACCGATCACCCTGCCTTCGCAGGACATGGTGTTGGGATTATATTATATTTCCAAAGGGAAAAAATCAACGGAGACTGAAAAGATAAAAGGAGAAGGCAAAGCTTTTTATAATGCAGAAGAGGTGATCATTGCTTACAATGAAGGAAAAGTTGATCTGCATGCACAAATCAAGGTGAAAGCAAACGTCCGTAAAGAAAACGGAGAATTGCAAAATAAATTAATTGAAACTACTGTTGGTCGTGTAATATTCAACCAGCATGTTCCTGCGGAAGTAGGCTTTGTGAATGCATTGCTTACCAAGAAATCATTGAGGGAGATCATTGGTGATATCATCAAGATCACAAATGTTCCTAAAACAGCTAAATTCCTTGATGATATCAAGCAGCTCGGTTTCCGTACTGCCTTCCGCGGAGGTCTTTCGTTCAACATCAATGACCTTGTGATCCCGGAATTAAAGCAGGAGCTGGTAGAGTCAGCATCTGAAGAAGTGGAGGAAGTATGGGATAACTATAACATGGGGCTGATCACCAATAATGAACGTTACAACCAGATCATTGTTATATGGTCGCGTGTGGATACCCGTGTTAGCGAAACGCTGATCCGGGAAATGGCGACAGATAAGCAGGGCTTCAACTCTGTATATATGATGCTTGATTCCGGGGCCCGTGGTAGTAAGCAGCAGGTAAAGCAGCTTGCCGGTATCAGGGGACTGATGGCGAAGCCCCGTAAGAGCGGTTCCACAGGATCTGAGATCATTGAAAACCCGATCCTTTCCAACTTTAAAGACGGGTTGAATGTATTGGAATACTTTATCTCCACGCACGGTGCCCGTAAAGGTCTTGCCGATACGGCACTGAAAACTGCCGATGCCGGTTATCTTACCCGCCGTTTGGTAGACGTAGCCCAGGATGTGGTAATAAATGATGAAGATTGCGGAACCCTGAGAGGTATTGCCATCAGTGCGCTGAAAGACAATGAAGATATTGTAGAGCCATTGTATGACAGGATACTGGGACGTACTTCCGTTCATGACGTATATGATCCGCAGACAGACAAATTAATT
PROTEIN sequence
Length: 551
EAIDSLFDNSRKSNAVKAEGGRALKSLSDVLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHECGLPKDMAAELFKPFIIRKLIERGIVKTVKSARKLVDRKEAIVWDILENILKGHPVMLNRAPTLHRLSIQAFQPRLVEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSSAAILEAQLLMLSSHNILNPQNGTPITLPSQDMVLGLYYISKGKKSTETEKIKGEGKAFYNAEEVIIAYNEGKVDLHAQIKVKANVRKENGELQNKLIETTVGRVIFNQHVPAEVGFVNALLTKKSLREIIGDIIKITNVPKTAKFLDDIKQLGFRTAFRGGLSFNINDLVIPELKQELVESASEEVEEVWDNYNMGLITNNERYNQIIVIWSRVDTRVSETLIREMATDKQGFNSVYMMLDSGARGSKQQVKQLAGIRGLMAKPRKSGSTGSEIIENPILSNFKDGLNVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVINDEDCGTLRGIAISALKDNEDIVEPLYDRILGRTSVHDVYDPQTDKLI