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SCNpilot_cont_500_bf_scaffold_37967_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 362..733

Top 3 Functional Annotations

Value Algorithm Source
large conductance mechanosensitive channel protein MscL n=1 Tax=Niabella aurantiaca RepID=UPI0003643D9A similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 140.0
  • Bit_score: 144
  • Evalue 6.70e-32
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 146.0
  • Bit_score: 135
  • Evalue 4.40e-29
large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 132.0
  • Bit_score: 128
  • Evalue 1.60e-27

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Taxonomy

Elizabethkingia meningoseptica → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 372
ATGGGCTTCTTTAAAGAATTCAAAGAATTCGCCATGAAAGGTAATATTGTTGACCTTGCTGTGGCTGTTATCATTGGAGGCGCTTTTGGTAAAATTGTAACAGCGCTTACTGATACTATTATTATGCCGATCATCAGTCTTGTTGTTGGCAAAGGCGGCGTTTCCGATATTAAACTCACAGTAGGGCAAACTATATTTCCTATAGGTGGTTTTTTGCAAGCAGTGATTGACTTTATACTCATAGCTTTTGTTTTATTTATAATTATTAAATCAATGAATGCTGTCGTAAAGAAGACTCCTCCTCCACCTGCAGGTCCGTCTTCAACCGATCAACTGCTGATGGAAATCAGGGACGAGTTGAAGAAAGGATAG
PROTEIN sequence
Length: 124
MGFFKEFKEFAMKGNIVDLAVAVIIGGAFGKIVTALTDTIIMPIISLVVGKGGVSDIKLTVGQTIFPIGGFLQAVIDFILIAFVLFIIIKSMNAVVKKTPPPPAGPSSTDQLLMEIRDELKKG*