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SCNpilot_cont_500_bf_scaffold_40489_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(623..1549)

Top 3 Functional Annotations

Value Algorithm Source
Putative anti sigma factor n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VM73_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 31.6
  • Coverage: 253.0
  • Bit_score: 123
  • Evalue 3.10e-25
Fec operon regulator FecR {ECO:0000313|EMBL:KHJ39289.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.0
  • Coverage: 247.0
  • Bit_score: 138
  • Evalue 1.70e-29
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 310.0
  • Bit_score: 121
  • Evalue 3.70e-25

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 927
TCTTTTCTCCGGCAATATCCGGCACAATTCGATGCAGTAATGGAAGCCCGCAGCAGAGTACAGGCAACAGCCACTCCTGTTGGGGAACTGACGACTACCGAGAAAAACGAATTAAGAAGCCAGATTTTTGAAGGATTACAGTTACCTCCCGGCCAGGATACTAACACCCCGTCAAAAAAAAACCCGAATACATGGCTGATGGCCGCGGCGGTCGCCGGCTTGCTGCTGATTGGCGGAGCTGTCTGGCTGTTATTTAGCCAACACACCCCGCCACCTACTCTTTATACCCATACAACAGCTCCCCGCCAGGTTAAAGAAATTATTTTGCCGGACAGCTCAATTGTAATTCTTAACGGTAATTCATCCATTTGGTATGATGCAGCATTTCAACAGCTTCCCCAAAGAGAAGTACATCTCCTGGGTAATGCTTATTTTAAAGTGAAAAGAACCGTAAACAATCATCCCTTCATTGTATATGCCAACCAGGTAACTATTCATGTTACAGGCACTGAATTCAATGTGGATGCCCGCAGCGAGGCAACAGATGTTGTACTGACCAAGGGGAATATCAGTATTTCTTTAGCTGACAAATATCGTAGCGCCCAACCTACATCGTTGGTCGCCGGCGAAGAATTCAGGATAGATACGCTAAACCACACTTTTATCACCCAAAAAACAAATACAGAACTGTATACAACAGCCTGGGAAAAAGGAGAATGGCATTTTGAATCCACAACACTGGAACAAATAGCCACGCTGATACAACAATTTTATGGCACAACCGTAACATTTAAAAACAACAATAGCGCTAAGCTTACCATCACTGCCGTGTTATCGGTACACAGCCTTCCGACATTAATCCATGTAATTGAAAAAACGCTGAATATAACCATTATTGAAACCGACAATGAATTGATCATCCATTAA
PROTEIN sequence
Length: 309
SFLRQYPAQFDAVMEARSRVQATATPVGELTTTEKNELRSQIFEGLQLPPGQDTNTPSKKNPNTWLMAAAVAGLLLIGGAVWLLFSQHTPPPTLYTHTTAPRQVKEIILPDSSIVILNGNSSIWYDAAFQQLPQREVHLLGNAYFKVKRTVNNHPFIVYANQVTIHVTGTEFNVDARSEATDVVLTKGNISISLADKYRSAQPTSLVAGEEFRIDTLNHTFITQKTNTELYTTAWEKGEWHFESTTLEQIATLIQQFYGTTVTFKNNNSAKLTITAVLSVHSLPTLIHVIEKTLNITIIETDNELIIH*