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SCNpilot_cont_500_bf_scaffold_45782_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 938..1402

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor SusC {ECO:0000313|EMBL:KHJ38737.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 145.0
  • Bit_score: 93
  • Evalue 3.10e-16
TonB-linked outer membrane protein, SusC/RagA family id=1810368 bin=GWE2_Bacteroidetes_42_39 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 145.0
  • Bit_score: 92
  • Evalue 2.90e-16
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 145.0
  • Bit_score: 91
  • Evalue 2.70e-16

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Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 465
ATGAGAATATTTCAACTTACGGGTAAATTTATGCCCGGGAGTAACAGCGGGAAAATTTTACTTATCATGAAACTAACTGCAGTTTTTACCTGCCTGCTGACGCTGAATCTTTCAGCAAAAGTCCATTCACAAACCTCTGTAACGCTCCGGCTAAAACAAGTTTCTTTAAACCAGGTATTTTTAGAAATAGAAAAGAAGACATCCTTTCGTTTCCTGTACAATGATAAGATAGTACATGATGAGGCTAAAGTAACCCTGGACGTTAAAGATGAAGGGGTGCTGGATGTGATGAAGATCCTGTTAAAGCAGACATCGCTTGATTTTATTGTAAGAGACGACGATCTTATTGTAATAGTAGATAAAGTGAAGACGAACGTGGGCATTCCGGTGCATGGCATCATAAAAAATTCTAAAGGCCAGCCGGCAGAAGGTGTTTCCGTTGTGGAAAAAGGAACTCAAAACGGA
PROTEIN sequence
Length: 155
MRIFQLTGKFMPGSNSGKILLIMKLTAVFTCLLTLNLSAKVHSQTSVTLRLKQVSLNQVFLEIEKKTSFRFLYNDKIVHDEAKVTLDVKDEGVLDVMKILLKQTSLDFIVRDDDLIVIVDKVKTNVGIPVHGIIKNSKGQPAEGVSVVEKGTQNG