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SCNpilot_cont_500_bf_scaffold_57801_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 1..657

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD/TolR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRN1_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 205.0
  • Bit_score: 180
  • Evalue 2.00e-42
Putative ExbD/TolR family membrane protein {ECO:0000313|EMBL:GAO41472.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 219.0
  • Bit_score: 200
  • Evalue 2.60e-48
biopolymer transport protein ExbD/TolR similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 205.0
  • Bit_score: 180
  • Evalue 6.20e-43

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 657
CCAAAAGTAAAAGTAGCCAAAAAAAGTACGTGGGTAGATATGACAGCTTTTGCGGATGTGTCATTTCTGATCCTTACCTTTTTCATTCTTGCTACCAAGTTCAAGCCTGATGAGCCTGTGGAGGTTAAGTTCCCCAGCTCCGTGTCGGCCGATAAGATCCCTGAAATGGATGCATTCTTGATAACTATTGATAAAGACGGCAGGGTTTTCGTACAGATGGATGATCCCAACGCAAGAAAATCTATCGCCGAAAACCTGAATGAAACACGTAACCTGGGACTTACCCCGGCTAATATTAAGTCGTTTACAAACTCTCCCAGTATTGGCGTGCCATTCGCAGGCTTAAAAAATCTGTTGGCCATGGAACCTGAGCAGCAGAAAAATGTAAGACAACCGGGTATCCCGGTTCCTGATTCTACAGGCGGTGAGCTTTATTATTGGATCAGAGATGCAAAATCTACCTATGCCGGTAAAAAGGTTTCCTGGTTGATCAAAGCGGATGATGCTACCAAGTATCCTGTAATCAAGAATGTGCTTGAAGCCTTTAAACGTAATGATATCAACAAATTCCAGTTGGTAACAAAATTCCGTGATGCCCCTATAGGGACGCCATTGTGGAATACAAGGCAAAACCAGATAGGAGCAGGCAAAAAGTAG
PROTEIN sequence
Length: 219
PKVKVAKKSTWVDMTAFADVSFLILTFFILATKFKPDEPVEVKFPSSVSADKIPEMDAFLITIDKDGRVFVQMDDPNARKSIAENLNETRNLGLTPANIKSFTNSPSIGVPFAGLKNLLAMEPEQQKNVRQPGIPVPDSTGGELYYWIRDAKSTYAGKKVSWLIKADDATKYPVIKNVLEAFKRNDINKFQLVTKFRDAPIGTPLWNTRQNQIGAGKK*