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SCNpilot_cont_500_bf_scaffold_62169_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(3..1082)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 375.0
  • Bit_score: 309
  • Evalue 4.90e-81
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000303A2B1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 360.0
  • Bit_score: 347
  • Evalue 1.20e-92
  • rbh
PAS/PAC sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 375.0
  • Bit_score: 309
  • Evalue 1.10e-81

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1080
ATGCAGTCTCCCATTCCTATGACAATATTCAGGGGGAAGGATCATGTTATTGAAATGGCCAATACCATAATGTTTGAAAGGATATGGCGTAAAAAAGAATCGGAAGTAATTGGCAGGAGAGTTGTAGACGTATTCCCGGAATTACAGGGACAAAAATACCCTGAGCTGCTGGATAAAGTATATAACTCTGCGCAACCGTATCGCGAAAGCGAGTCCGTTGCACTTGTGAAAGGTAATGATGGTATAAAAAAGTTTTACCTGGATTTTGAGTATGCTCCTCTTTTTGATCCGGGAGGTGCAGTGTCAGGCATAATGGTGACAGTAAATGATGTTACGGAAAAAGTGCTTGCCAGGAAAAAAGCAGAAGACAGCGAGTTGAGATTCCGGAACATTGCCGACAGGGTGCCGGTACTAATATGGATGGCAGGAACAGACAGGCACTTCAGTTTTTTTAATACAGCATGGCTGAATTTTACGGGAAGAACCATGAAAGAAGAATTGGATAACAGATGGATTGAAGGCATTCACCCGGAAGACAGAGAACGTTATAGAGATACCTACCGGGCTTCTTTTGACAAACGCGAAGAGTTTCATATAGATTATCGTCTCCGGCGGTATGATGGTTTATATCGCTGGGTATCCGATCATGGCGTACCGAGATTTACCAATGATGGTGTATTTGAAGGGTATATAGGTGCATGTATGGATATTCACGATGAACTTTTATCGCAGACGGCTCTCAGGGAAAATGAAGAAAGGCTGAATATTGCCATTGAAGCAGGAGAACTTGGAACATGGGAACTGGATATGGCAACCGATACCATTATTTGTTCGGAACGGTATACAGATATTTTTGGCTATCCCAAAGGCATTCCCCTGACATATACACAAATTTCCAGGCAGATATTCCCTGACGATCTTGCCCAAAGAAACGAGGCATTCCGGGAGGGGCTGAAGCATGGGATGATTCACTATGAGGTAAGGATCATATCACAGGATAATACTGTGAAATGGATAGAAAAAAGAGGAAAAGTTTTTTATGATGAAACCGGCGGGCCCAAAAAGCTGATCGGAACGCTC
PROTEIN sequence
Length: 360
MQSPIPMTIFRGKDHVIEMANTIMFERIWRKKESEVIGRRVVDVFPELQGQKYPELLDKVYNSAQPYRESESVALVKGNDGIKKFYLDFEYAPLFDPGGAVSGIMVTVNDVTEKVLARKKAEDSELRFRNIADRVPVLIWMAGTDRHFSFFNTAWLNFTGRTMKEELDNRWIEGIHPEDRERYRDTYRASFDKREEFHIDYRLRRYDGLYRWVSDHGVPRFTNDGVFEGYIGACMDIHDELLSQTALRENEERLNIAIEAGELGTWELDMATDTIICSERYTDIFGYPKGIPLTYTQISRQIFPDDLAQRNEAFREGLKHGMIHYEVRIISQDNTVKWIEKRGKVFYDETGGPKKLIGTL