ggKbase home page

SCNpilot_cont_500_bf_scaffold_65285_1

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(117..1031)

Top 3 Functional Annotations

Value Algorithm Source
(R)-citramalate synthase; K09011 D-citramalate synthase [EC:2.3.1.182] similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 305.0
  • Bit_score: 529
  • Evalue 7.50e-148
2-isopropylmalate synthase n=1 Tax=Segetibacter koreensis RepID=UPI0003709C3F similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 305.0
  • Bit_score: 529
  • Evalue 1.80e-147
2-isopropylmalate synthase {ECO:0000313|EMBL:KIC90606.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 306.0
  • Bit_score: 545
  • Evalue 5.90e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 915
CATTTTGATTTTCACGGTCATAATGATTACGACCTGGGTACAGCCAATGTGCTGGAAGCAGTGAGAGCAGGGGTGCATGGTCTGCACCTTACAGTAAACGGCATGGGTGAAAGAGCGGGCAATGCGCCGCTTGCCAGCGCGATTGCGGTATTGAATGATTTTATGCCGGGCGTTAAAACATCCGTAGTCGAAAAGTCATTATATAGTGTAAGCAAGCTTGTTGAAACTTTTTCCGGTTTCCGTATTCCTGCCAATAAACCTGTTGTAGGGGAGAATGTTTTTACACAAACGGCGGGCATACATGCCGACGGCGATAAGAAAAATAAATTGTATTTCAGTGATCTTATGCCCGAGCGCTTCGGCAGGCAGCGAAGGTATGCGCTGGGCAAGACCAGCGGAAAAGCAAATATTGAAAATAATTTACAACAGTTAGGCATTCAGCTTTCGGATAAGGATCTTAAAAAAGTCACCCAGCGCATAATAGAGCTTGGCGACAGGAAAGAAGTGGTAACTCAGGCAGACCTGCCTTATATCATTTCAGACATACTTGACAATACTATTGAAGATAAAGTGAGAATTGATAATTATGTGCTGACGCATTCCAAAAGCATGCATCCGTCGGTAACGATAAAGGTTACCGTGCATGGTGATTCGTATGAAGAGCATGCGCAGGGCGATGGGCAGTATGATGCTTTTATGAACGCATTGAAAAAAGTATATAAGCAGAGAAAGACAGAGCTGCCGTTACTAACGGATTATACAGTTAGGATACCTCCCGGTGGCAAGAGTGATGCATTGTGTGAAACTGTAATTACCTGGAGGCATAATAATAAAGAATTCAAGACCCGTGGGCTTGACAGCGACCAGACGGTTTCGGCAATAAAGGCGACGCAAAAGATGCTGAACATATTGTAG
PROTEIN sequence
Length: 305
HFDFHGHNDYDLGTANVLEAVRAGVHGLHLTVNGMGERAGNAPLASAIAVLNDFMPGVKTSVVEKSLYSVSKLVETFSGFRIPANKPVVGENVFTQTAGIHADGDKKNKLYFSDLMPERFGRQRRYALGKTSGKANIENNLQQLGIQLSDKDLKKVTQRIIELGDRKEVVTQADLPYIISDILDNTIEDKVRIDNYVLTHSKSMHPSVTIKVTVHGDSYEEHAQGDGQYDAFMNALKKVYKQRKTELPLLTDYTVRIPPGGKSDALCETVITWRHNNKEFKTRGLDSDQTVSAIKATQKMLNIL*