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SCNpilot_cont_500_bf_scaffold_23255_1

Organism: SCNPILOT_CONT_500_P_Amoebophilus_asiaticus_42_9_0

near complete RP 47 / 55 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3..2390)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 796.0
  • Bit_score: 1428
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 796.0
  • Bit_score: 1428
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ETZ0_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 796.0
  • Bit_score: 1428
  • Evalue 0.0

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2388
ATTTTAGATATATTTGGTTTATCTGAAGAAATAAAAGCAAATAAAACGAATTTAAAACAGAAAATCGGAAGAAAGCTCGCAGCACGTGTATTAAGATCTTGGACCGAAGATTTTATCGATGAAGATACCGGAGAAGTGATCACACTAGACCGTAACGAGGTAGTGTTAGAAAGAAATGCTATTATTGACGAATCTGCTATAGAAGCAATATTACAATCGGGAACTTCTTCTATAGTATTATATCGAGAAGATATCAATATTGCTGACTACGAGATCATATACAATACCCTACATAAAGATAACGCTAACTCCGAAAAAGAAGCCGTAGAACAAATATATCGCCAACTTCGTAGTTCTGAGCCGCCTGATGAACAAACAGCACGAGAAGCGATACAAAGCTTGTTTTTTAGTACCAAACGATATAGCCTTGGAGAAGTTGGTCGTTATAAAATTAACACCAAACTAGGTTTAAACATCCCCATGGATGTTAGCATACTTACCAAAGAGGATATTTTACAAATTGTTAAATATTTAATTGGGCTTATTAATTCCAAAGCTACGGTGGATGATATTGATCACTTGAGTAATAGAAGGCTTCGCAGTGTTGGTGAGCAACTATATGGTCAGTTTGAGTTAGGATTGTCTAGAATGGCTCGAACTATCCGAGAAAGGATGAATGTGAGGGACAACGAAGAATTTAAGCCTAGTGATTTAGTAAATGCGAGAACCCTCTCTTCAGTTATCAACACATTTTTTGGTACCAATCCACTCTCGCAATTTATGGACCAAGTCAATCCTTTGGCAGAGGTTACGCATAAAAGAAGGATTTCTGCTTTAGGACCTGGTGGACTTTCAAGAGATCGAGCTGGTTTTGAAATCAGGGATATTCATTATACCCACTATGGACGCCTTTGTACCGTTGAAACGCCAGAAGGACCTAATATTGGTTTGATATCTTCTTTATCTGTGCATGCTAGGATCAATGATATGGGCTTTATTGTAACCCCCTATAGAAAAATCAAAAACGGTGTGGTAGACTTCAAAGAAAATGCCCAATACCTAACTGCAGAAGAGGAAGATAAAATCAAGATTGCACAAGCCAGCTCCAAGCTAGATGACAAAGGACATTTTATAGAAGAAAAAGTAAAAACTCGTTATGCAGGAGATTTTCCGATAGTTGGCCCAGAAGATATCTCTTTCATAGATATCGCTCCTAACCAGATTGTATCTATTTCTGCTTCACTGATCCCATTCTTGGAGCATAATGATGCTAGCCGTGCGCTGATGGGTTCAAACATGCAGCGTCAGTCAGTACCACTCATTCAGCCTGAGGCACCTATTGTTGGTACAGGAATAGAAAAGCGGATCGCTCAAGATTTTAGAGGTCTGGTTCGAGCTGAAAAAGATGGGGTAGTGGAATATGTAGATGCTAATAAAATTGTAATCAATTACGACTTTACAGAAGATGAGCAGCTCATATCTTTTGATAAATCTTCTATTACTTATCCTTTACTTAAAATGAAAGGTACTAACCAAGGTACCTGTGTCAACTTAAAACCTATTGTAGCCAAAGGTGACGTTGTCAAACAAGGTCAAATCTTATGTGAAGGATATGCTACTCAAAATGGCGAACTAGCTTTAGGAAGAAATCTCAAAGTAGCCTTTATGTCTTGGCAAGGTTATAACTATGAGGATGCTATTGTTATTTCAGAGCGTATTGTAAGAGAAGATCTATTCACTTCCATTCACATAGAAGAATTCTCGTTAGAAGCACGGGACACGAAACTCGGTGAAGAAGAGTTAACCTCTGAGATTCCTAACTTAAGTGAAGAAGCTTTAAGCAATCTAGATAAAAATGGTATCGTTGCCGTCGGAACTTCTATAAAAGAAGGGGATGTACTCATTGGTAAGATAACTCCTAAAGGAGAGGCGGATCCTAGCCCTGAAGAAAAGCTTTTAAGAGCGATATGTGGTGATAAAGCAGGGGATGTAAAAGATGCTTCTCTAAAGGTACCACCTTCTATGCAAGGTGTGGTAGTAAAAACTAGATTGTTTTCAAAACCTAGAACAGATAAAAACTCTCGAGCTAAGGTCAAGAAAGAATTAGAAATCTTGAAAAAGGCGCATGCCAAACAGCTTACTGATTTGCGTGCAGTTATGATAGGGAAGCTCAAAAAGCTATTAGAAGGTGAAAAGTCAAAAGGAGTCTATCATCAATTTGGAGATGAATTAATAGCTCCAGGAAAAGCTTTCACGGCTGAGTTGATTGAGAAAAACTTATTCCCTAGCAAAAATTTATATCGAGACGAAAGCTACTACAACATTCCAGAAGAGACTAACTTGGTAGGTGAAGTAATGCTTGACAACTGGACAGATAATAAGAAGAAG
PROTEIN sequence
Length: 796
ILDIFGLSEEIKANKTNLKQKIGRKLAARVLRSWTEDFIDEDTGEVITLDRNEVVLERNAIIDESAIEAILQSGTSSIVLYREDINIADYEIIYNTLHKDNANSEKEAVEQIYRQLRSSEPPDEQTAREAIQSLFFSTKRYSLGEVGRYKINTKLGLNIPMDVSILTKEDILQIVKYLIGLINSKATVDDIDHLSNRRLRSVGEQLYGQFELGLSRMARTIRERMNVRDNEEFKPSDLVNARTLSSVINTFFGTNPLSQFMDQVNPLAEVTHKRRISALGPGGLSRDRAGFEIRDIHYTHYGRLCTVETPEGPNIGLISSLSVHARINDMGFIVTPYRKIKNGVVDFKENAQYLTAEEEDKIKIAQASSKLDDKGHFIEEKVKTRYAGDFPIVGPEDISFIDIAPNQIVSISASLIPFLEHNDASRALMGSNMQRQSVPLIQPEAPIVGTGIEKRIAQDFRGLVRAEKDGVVEYVDANKIVINYDFTEDEQLISFDKSSITYPLLKMKGTNQGTCVNLKPIVAKGDVVKQGQILCEGYATQNGELALGRNLKVAFMSWQGYNYEDAIVISERIVREDLFTSIHIEEFSLEARDTKLGEEELTSEIPNLSEEALSNLDKNGIVAVGTSIKEGDVLIGKITPKGEADPSPEEKLLRAICGDKAGDVKDASLKVPPSMQGVVVKTRLFSKPRTDKNSRAKVKKELEILKKAHAKQLTDLRAVMIGKLKKLLEGEKSKGVYHQFGDELIAPGKAFTAELIEKNLFPSKNLYRDESYYNIPEETNLVGEVMLDNWTDNKKK