ggKbase home page

SCNpilot_cont_500_bf_scaffold_52787_1

Organism: SCNPILOT_CONT_500_P_Amoebophilus_asiaticus_42_9_0

near complete RP 47 / 55 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2..616)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EU52_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 205.0
  • Bit_score: 386
  • Evalue 2.20e-104
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 205.0
  • Bit_score: 386
  • Evalue 6.90e-105
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ACE05471.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 205.0
  • Bit_score: 386
  • Evalue 3.10e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 615
ATGAGACAGCTCAAAATAAGTAAGCAAATTACGAATCGTGAAAGCCAGTCATTGGATAAATATCTTCAAGAGATAGGTAGAGTAGATCTACTGACTCCAGAAGAGGAAGTAGAACTTGCTAAACGTATTAAATCAGGAGATAAAGCTGCCTTGGAGCAACTGACTAAAGCTAACTTACGTTTCGTAGTATCTGTGGCTAAACAGTACCAAAATCAGGGTTTATCATTGAGTGACTTAATCAACGAAGGGAACCTAGGCCTCATTAAATCAGCCCAACGTTTTGATGAGACAAGGGGATTTAAATTTATCTCTTACGCTGTATGGTGGATCAGGCAATCTATCTTACAAGCTTTAGCCGAACAGTCTCGTATCGTGCGTTTGCCGCTAAACAGGGTGGGTACACTGAACAAATTATCTAGAACATTCTCTCAACTTGAACAAAAGTTTAAACGTGAGCCAACCGCCGAAGAGCTTGCCGAAGAGCTAGAGGTCACAGCCAGTGAAGTAAGTGATACCATGAAAATATCTGGGCGCCATGTTTCTGTGGATGCTCCCTTTGTACAAGGGGAAGAACACAGCTTGTTAGATGTCTTGGAGGATGATGACGAAGATAAA
PROTEIN sequence
Length: 205
MRQLKISKQITNRESQSLDKYLQEIGRVDLLTPEEEVELAKRIKSGDKAALEQLTKANLRFVVSVAKQYQNQGLSLSDLINEGNLGLIKSAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNRVGTLNKLSRTFSQLEQKFKREPTAEELAEELEVTASEVSDTMKISGRHVSVDAPFVQGEEHSLLDVLEDDDEDK