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SCNpilot_cont_500_bf_scaffold_12612_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 3694..4026

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbC n=1 Tax=Afipia birgiae RepID=UPI000314BDB5 similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 110.0
  • Bit_score: 163
  • Evalue 1.30e-37
Conjugal transfer protein TrbC {ECO:0000313|EMBL:CDX24333.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 110.0
  • Bit_score: 178
  • Evalue 4.10e-42
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 110.0
  • Bit_score: 162
  • Evalue 8.80e-38

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGATCTTGAAGACCCTTCGCGCCCGTCCACGGATCGCCGCGACCGCGCTCGCTACCTCGATCAGCTTCACCCTGACCCAGGCAACCTATGCCGCCGGATCGCCGAGGCCCTGGGAAGAGCCGCTGCAGCAGGTTCTCGAACCCATCGAGGGGCCTGTCGCCAAGATCATCGCGGTGATCATCATCATCGTCACCGGCCTCACCCTCGCCTTCGGCGACACCTCGGGCGGTTTCCGCCGGCTGATTCAGATTGTCTTCGGTCTCAGCATCGCCTTCGCCGCGTCCAGCTTCTTCCTCTCCTTCTTCAGCTTCGGCGGCGGAGCGTTGATCTGA
PROTEIN sequence
Length: 111
MILKTLRARPRIAATALATSISFTLTQATYAAGSPRPWEEPLQQVLEPIEGPVAKIIAVIIIIVTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALI*