ggKbase home page

SCNpilot_cont_500_bf_scaffold_14935_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

partial RP 27 / 55 BSCG 28 / 51 MC: 3 ASCG 10 / 38
Location: 6933..7307

Top 3 Functional Annotations

Value Algorithm Source
Type II/IV secretion system protein TadC, associated with Flp pilus assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS7_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 125.0
  • Bit_score: 121
  • Evalue 8.10e-25
Type II secretion system protein {ECO:0000313|EMBL:KKB13173.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 127.0
  • Bit_score: 143
  • Evalue 2.80e-31
type II/IV secretion system protein TadC, associated with Flp pilus assembly; K12511 tight adherence protein C similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 125.0
  • Bit_score: 121
  • Evalue 2.50e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia geojensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGACCTCGTCGCCACTCTCACCAACACCCAGTTCCTGGTCGCCGTGCTCGCCGCGGTGGCGGCAGCGGCGGTGGTGTTCTCGATCGGCGCCACCTTCTTTTCCGGCAACTCGCAGATGCGCCAGCGTATCCGGCGCGTCGCGCTCGAACGCGAAAAGCTGCGGGCCGAGGAAATGGCGCGCCTGCGCGGCACCGGCGCCGGCAACGGCGATCAGCCACGCACCATTCGCCACGCGGCCGGCCGCGACTACATGAAGAACATCGTCGAGCGCTTCTCGCTCGAAAAGGCCTTCATGGACGAGAGCACGGCCGAAAAGCTGGCCCGCGCCGGCTATCGCGGCCAGGCGGCGATGACCACCTTCCTGTTCCTGCGC
PROTEIN sequence
Length: 125
MDLVATLTNTQFLVAVLAAVAAAAVVFSIGATFFSGNSQMRQRIRRVALEREKLRAEEMARLRGTGAGNGDQPRTIRHAAGRDYMKNIVERFSLEKAFMDESTAEKLARAGYRGQAAMTTFLFLR